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Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes

Guanjue Xiang
Xi He
Belinda M. Giardine
Kathryn J. Isaac
Dylan J. Taylor
Rajiv C. McCoy Camden Jansen Cheryl A. Keller Alexander Q. Wixom April Cockburn Amber Miller Qian Qi Yanghua He Yichao Li Jens Lichtenberg Elisabeth F. Heuston Stacie M. Anderson Jing Luan Marit W. Vermunt Feng Yue Michael E.G. Sauria Michael C. Schatz James Taylor Berthold Göttgens Jim R. Hughes Douglas R. Higgs Mitchell J. Weiss Yong Cheng Gerd A. Blobel David M. Bodine
... [+25 authors] ...,
Yu Zhang
Qunhua Li
Shaun Mahony
Ross C. Hardison

First Published July 1, 2024

Resource

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

Guanjue Xiang
Cheryl A. Keller
Elisabeth Heuston
Belinda M. Giardine
Lin An
Alexander Q. Wixom Amber Miller April Cockburn Michael E.G. Sauria Kathryn Weaver Jens Lichtenberg Berthold Göttgens Qunhua Li David Bodine Shaun Mahony James Taylor Gerd A. Blobel Mitchell J. Weiss Yong Cheng Feng Yue
... [+15 authors] ...,
Jim Hughes
Douglas R. Higgs
Yu Zhang
Ross C. Hardison

First Published March 4, 2020

Resource

C. elegans using direct RNA sequencing" > The full-length transcriptome of C. elegans using direct RNA sequencing

Nathan P. Roach
Norah Sadowski
Amelia F. Alessi
Winston Timp
James Taylor
John K. Kim

First Published February 5, 2020

Resource

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads

Rei Kajitani
Kouta Toshimoto
Hideki Noguchi
Atsushi Toyoda
Yoshitoshi Ogura
Miki Okuno Mitsuru Yabana Masayuki Harada Eiji Nagayasu Haruhiko Maruyama
... [+5 authors] ...,
Yuji Kohara
Asao Fujiyama
Tetsuya Hayashi
Takehiko Itoh

First Published April 22, 2014

Resource

Coelacanth genomes reveal signatures for evolutionary transition from water to land

Masato Nikaido
Hideki Noguchi
Hidenori Nishihara
Atsushi Toyoda
Yutaka Suzuki
Rei Kajitani Hikoyu Suzuki Miki Okuno Mitsuto Aibara Benjamin P. Ngatunga Semvua I. Mzighani Hassan W.J. Kalombo Kawilarang W.A. Masengi Josef Tuda Sadao Nogami Ryuichiro Maeda Masamitsu Iwata Yoshitaka Abe Koji Fujimura Masataka Okabe Takanori Amano Akiteru Maeno Toshihiko Shiroishi Takehiko Itoh
... [+19 authors] ...,
Sumio Sugano
Yuji Kohara
Asao Fujiyama
Norihiro Okada

First Published July 22, 2013

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The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains

Toyoyuki Takada
Toshinobu Ebata
Hideki Noguchi
Thomas M. Keane
David J. Adams
Takanori Narita Tadasu Shin-I Hironori Fujisawa Atsushi Toyoda Kuniya Abe Yuichi Obata Yoshiyuki Sakaki
... [+7 authors] ...,
Kazuo Moriwaki
Asao Fujiyama
Yuji Kohara
Toshihiko Shiroishi

First Published April 19, 2013

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Windshield splatter analysis with the Galaxy metagenomic pipeline

Sergei Kosakovsky Pond
Samir Wadhawan
Francesca Chiaromonte
Guruprasad Ananda
Wen-Yu Chung
James Taylor
Anton Nekrutenko

First Published October 9, 2009