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A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes

  • Ran Li
  • Mian Gong
  • Xinmiao Zhang
  • Fei Wang
  • Zhenyu Liu
  • Lei Zhang Qimeng Yang Yuan Xu Mengsi Xu Huanhuan Zhang Yunfeng Zhang Xuelei Dai Yuanpeng Gao Zhuangbiao Zhang Wenwen Fang Yuta Yang Weiwei Fu Chunna Cao Peng Yang Zeinab Amiri Ghanatsaman Niloufar Jafarpour Negari Hojjat Asadollahpour Nanaei Xiangpeng Yue Yuxuan Song Xianyong Lan Weidong Deng Xihong Wang Chuanying Pan Ruidong Xiang Eveline M. Ibeagha-Awemu Pat (J.S.) Heslop-Harrison
  • ... [+26 authors] ...,
  • Benjamin D. Rosen
  • Johannes A. Lenstra
  • Shangquan Gan
  • Yu Jiang
  • First Published April 3, 2023
Resource

Assembly of a pangenome for global cattle reveals missing sequences and novel structural variations, providing new insights into their diversity and evolutionary history

  • Yang Zhou
  • Lv Yang
  • Xiaotao Han
  • Jiazheng Han
  • Yan Hu
  • Fan Li Han Xia Lingwei Peng Clarissa Boschiero Benjamin D. Rosen Derek M. Bickhart Shujun Zhang Aizhen Guo
  • ... [+8 authors] ...,
  • Curtis P. Van Tassell
  • Timothy P.L. Smith
  • Liguo Yang
  • George E. Liu
  • First Published August 17, 2022
Resource

Comprehensive analyses of 723 transcriptomes enhance genetic and biological interpretations for complex traits in cattle

  • Lingzhao Fang
  • Wentao Cai
  • Shuli Liu
  • Oriol Canela-Xandri
  • Yahui Gao
  • Jicai Jiang Konrad Rawlik Bingjie Li Steven G. Schroeder Benjamin D. Rosen Cong-jun Li Tad S. Sonstegard Leeson J. Alexander Curtis P. Van Tassell Paul M. VanRaden John B. Cole Ying Yu
  • ... [+12 authors] ...,
  • Shengli Zhang
  • Albert Tenesa
  • Li Ma
  • George E. Liu
  • First Published May 18, 2020
Resource

A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples

  • Samia N. Naccache
  • Scot Federman
  • Narayanan Veeraraghavan
  • Matei Zaharia
  • Deanna Lee
  • Erik Samayoa Jerome Bouquet Alexander L. Greninger Ka-Cheung Luk Barryett Enge Debra A. Wadford Sharon L. Messenger Gillian L. Genrich Kristen Pellegrino Gilda Grard Eric Leroy Bradley S. Schneider Joseph N. Fair Miguel A. Martínez Pavel Isa John A. Crump Joseph L. DeRisi
  • ... [+17 authors] ...,
  • Taylor Sittler
  • John Hackett
  • Steve Miller
  • Charles Y. Chiu
  • First Published June 4, 2014
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