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Exploring the epigenome profiles of repetitive elements with the WashU Repeat Browser

  • Jiawei Shen
  • Siyuan Cheng
  • Deepak Purushotham
  • Xiaoyu Zhuo
  • Alan Y Du
  • Wenjin Zhang
  • Daofeng Li
  • Ting Wang
  • First Published February 21, 2025
Resource

Comparing genomic and epigenomic features across species using the WashU Comparative Epigenome Browser

  • Xiaoyu Zhuo
  • Silas Hsu
  • Deepak Purushotham
  • Prashant Kumar Kuntala
  • Jessica K. Harrison
  • Alan Y. Du
  • Samuel Chen
  • Daofeng Li
  • Ting Wang
  • First Published May 8, 2023
Resource

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads

  • Rei Kajitani
  • Kouta Toshimoto
  • Hideki Noguchi
  • Atsushi Toyoda
  • Yoshitoshi Ogura
  • Miki Okuno Mitsuru Yabana Masayuki Harada Eiji Nagayasu Haruhiko Maruyama
  • ... [+5 authors] ...,
  • Yuji Kohara
  • Asao Fujiyama
  • Tetsuya Hayashi
  • Takehiko Itoh
  • First Published April 22, 2014
Resource

A biochemical landscape of A-to-I RNA editing in the human brain transcriptome

  • Masayuki Sakurai
  • Hiroki Ueda
  • Takanori Yano
  • Shunpei Okada
  • Hideki Terajima
  • Toutai Mitsuyama
  • ... [+1 authors] ...,
  • Atsushi Toyoda
  • Asao Fujiyama
  • Hitomi Kawabata
  • Tsutomu Suzuki
  • First Published January 9, 2014
Resource

Coelacanth genomes reveal signatures for evolutionary transition from water to land

  • Masato Nikaido
  • Hideki Noguchi
  • Hidenori Nishihara
  • Atsushi Toyoda
  • Yutaka Suzuki
  • Rei Kajitani Hikoyu Suzuki Miki Okuno Mitsuto Aibara Benjamin P. Ngatunga Semvua I. Mzighani Hassan W.J. Kalombo Kawilarang W.A. Masengi Josef Tuda Sadao Nogami Ryuichiro Maeda Masamitsu Iwata Yoshitaka Abe Koji Fujimura Masataka Okabe Takanori Amano Akiteru Maeno Toshihiko Shiroishi Takehiko Itoh
  • ... [+19 authors] ...,
  • Sumio Sugano
  • Yuji Kohara
  • Asao Fujiyama
  • Norihiro Okada
  • First Published July 22, 2013
Resource

The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains

  • Toyoyuki Takada
  • Toshinobu Ebata
  • Hideki Noguchi
  • Thomas M. Keane
  • David J. Adams
  • Takanori Narita Tadasu Shin-I Hironori Fujisawa Atsushi Toyoda Kuniya Abe Yuichi Obata Yoshiyuki Sakaki
  • ... [+7 authors] ...,
  • Kazuo Moriwaki
  • Asao Fujiyama
  • Yuji Kohara
  • Toshihiko Shiroishi
  • First Published April 19, 2013
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