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A framework to score the effects of structural variants in health and disease

Philip Kleinert
Martin Kircher

First Published February 23, 2022

Genome-wide mapping reveals R-loops associated with centromeric repeats in maize

Yang Liu
Qian Liu
Handong Su
Kunpeng Liu
Xue Xiao
Wei Li
Qianwen Sun
James A. Birchler
Fangpu Han

First Published July 9, 2021

Analysis of alternative polyadenylation from single-cell RNA-seq using scDaPars reveals cell subpopulations invisible to gene expression

Yipeng Gao
Lei Li
Christopher I. Amos
Wei Li

First Published May 25, 2021

Profiling the long noncoding RNA interaction network in the regulatory elements of target genes by chromatin in situ reverse transcription sequencing

Shilin Zhang
Yichen Wang
Lin Jia
Xue Wen
Zhonghua Du
Cong Wang Yajing Hao Dehai Yu Lei Zhou Naifei Chen Jingcheng Chen Huiling Chen Hui Zhang Ilkay Celik Günhan Gülsoy Jianjun Luo Baoming Qin Xueling Cui Zhonghui Liu Songling Zhang Miguel A. Esteban Ferhat Ay Wei Xu Runsheng Chen
... [+19 authors] ...,
Wei Li
Andrew R. Hoffman
Ji-Fan Hu
Jiuwei Cui

First Published July 17, 2019

A novel synthetic-genetic-array–based yeast one-hybrid system for high discovery rate and short processing time

Chung-Shu Yeh
Zhifeng Wang
Fang Miao
Hongyan Ma
Chung-Ting Kao
Tzu-Shu Hsu Jhong-He Yu Er-Tsi Hung Chia-Chang Lin Chen-Yu Kuan Ni-Chiao Tsai Chenguang Zhou Guan-Zheng Qu Jing Jiang Guifeng Liu Jack P. Wang
... [+11 authors] ...,
Wei Li
Vincent L. Chiang
Tien-Hsien Chang
Ying-Chung Jimmy Lin

First Published June 11, 2019

Guide Positioning Sequencing identifies aberrant DNA methylation patterns that alter cell identity and tumor-immune surveillance networks

Jin Li
Yan Li
Wei Li
Huaibing Luo
Yanping Xi
Shihua Dong Ming Gao Peng Xu Baolong Zhang Ying Liang Qingping Zou Xin Hu Lina Peng Dan Zou Ting Wang Hongbo Yang
... [+11 authors] ...,
Cizhong Jiang
Shaoliang Peng
Feizhen Wu
Wenqiang Yu

First Published January 22, 2019

3′ UTR lengthening as a novel mechanism in regulating cellular senescence

Meng Chen
Guoliang Lyu
Miao Han
Hongbo Nie
Ting Shen
Wei Chen Yichi Niu Yifan Song Xueping Li Huan Li Xinyu Chen Ziyue Wang Zheng Xia Wei Li Xiao-Li Tian Chen Ding Jun Gu Yufang Zheng Xinhua Liu
... [+14 authors] ...,
Jinfeng Hu
Gang Wei
Wei Tao
Ting Ni

First Published February 12, 2018

Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis

Hector L. Franco
Anusha Nagari
Venkat S. Malladi
Wenqian Li
Yuanxin Xi
Dana Richardson Kendra L. Allton Kaori Tanaka Jing Li Shino Murakami Khandan Keyomarsi Mark T. Bedford Xiaobing Shi
... [+8 authors] ...,
Wei Li
Michelle C. Barton
Sharon Y.R. Dent
W. Lee Kraus

First Published December 22, 2017

A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity

Fumitaka Inoue
Martin Kircher
Beth Martin
Gregory M. Cooper
Daniela M. Witten
Michael T. McManus
Nadav Ahituv
Jay Shendure

First Published November 9, 2016

Sequence determinants of improved CRISPR sgRNA design

Han Xu
Tengfei Xiao
Chen-Hao Chen
Wei Li
Clifford A. Meyer
Qiu Wu Di Wu Le Cong
... [+3 authors] ...,
Feng Zhang
Jun S. Liu
Myles Brown
X. Shirley Liu

First Published June 10, 2015

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