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Accurate estimation of intraspecific microbial gene content variation in metagenomic data with MIDAS v3 and StrainPGC

Byron J. Smith
Chunyu Zhao
Veronika Dubinkina
Xiaofan Jin
Liron Zahavi
Saar Shoer
Jacqueline Moltzau-Anderson
Eran Segal
Katherine S. Pollard

First Published April 10, 2025

CRX classifies clinical variants and reveals biochemical properties of the transcriptional effector domain" > Mutational scanning of CRX classifies clinical variants and reveals biochemical properties of the transcriptional effector domain

James L. Shepherdson
David M. Granas
Jie Li
Zara Shariff
Stephen P. Plassmeyer
Alex S. Holehouse
Michael A. White
Barak A. Cohen

First Published September 25, 2024

CRX have distinct cis-regulatory effects on enhancers and silencers in photoreceptors" > Pathogenic variants in CRX have distinct cis-regulatory effects on enhancers and silencers in photoreceptors

James L. Shepherdson
Ryan Z. Friedman
Yiqiao Zheng
Chi Sun
Inez Y. Oh
David M. Granas
Barak A. Cohen
Shiming Chen
Michael A. White

First Published February 14, 2024

Sequence determinants of polyadenylation-mediated regulation

Ilya Vainberg Slutskin
Adina Weinberger
Eran Segal

First Published September 17, 2019

Systematic interrogation of human promoters

Shira Weingarten-Gabbay
Ronit Nir
Shai Lubliner
Eilon Sharon
Yael Kalma
Adina Weinberger
Eran Segal

First Published January 8, 2019

Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators

David van Dijk
Eilon Sharon
Maya Lotan-Pompan
Adina Weinberger
Eran Segal
Lucas B. Carey

First Published December 13, 2016

Noise in gene expression is coupled to growth rate

Leeat Keren
David van Dijk
Shira Weingarten-Gabbay
Dan Davidi
Ghil Jona
Adina Weinberger
Ron Milo
Eran Segal

First Published September 9, 2015

Core promoter sequence in yeast is a major determinant of expression level

Shai Lubliner
Ifat Regev
Maya Lotan-Pompan
Sarit Edelheit
Adina Weinberger
Eran Segal

First Published May 12, 2015

Unraveling determinants of transcription factor binding outside the core binding site

Michal Levo
Einat Zalckvar
Eilon Sharon
Ana Carolina Dantas Machado
Yael Kalma
Maya Lotam-Pompan
... [+1 authors] ...,
Adina Weinberger
Zohar Yakhini
Remo Rohs
Eran Segal

First Published March 11, 2015

Molecular dissection of the genetic mechanisms that underlie expression conservation in orthologous yeast ribosomal promoters

Danny Zeevi
Shai Lubliner
Maya Lotan-Pompan
Eran Hodis
Rita Vesterman
Adina Weinberger
Eran Segal

First Published October 7, 2014

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