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Dynamic A-to-I RNA editing in response to gut microbiome in honey bees

Yuange Duan
Min Huang
Lin Ye
Ling Ma
Yashuai Wu
Yating Du Jiyao Liu Fan Song Li Tian
... [+4 authors] ...,
Wanzhi Cai
Hu Li
Xin Zhou
Shiqi Luo

First Published March 4, 2026

Simultaneous profiling of host expression and microbial abundance by spatial metatranscriptome sequencing

Lin Lyu
Xue Li
Ru Feng
Xin Zhou
Tuhin K. Guha
Xiaofei Yu Guo Qiang Chen Yufeng Yao
... [+3 authors] ...,
Bing Su
Duowu Zou
Michael P. Snyder
Lei Chen

First Published March 27, 2023

Precision environmental health monitoring by longitudinal exposome and multi-omics profiling

Peng Gao
Xiaotao Shen
Xinyue Zhang
Chao Jiang
Sai Zhang
Xin Zhou
Sophia Miryam Schüssler-Fiorenza Rose
Michael Snyder

First Published June 6, 2022

Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages" > Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages

Jennifer F. Hughes
Helen Skaletsky
Tatyana Pyntikova
Natalia Koutseva
Terje Raudsepp
Laura G. Brown Daniel W. Bellott Ting-Jan Cho Shannon Dugan-Rocha Ziad Khan Colin Kremitzki Catrina Fronick Tina A. Graves-Lindsay Lucinda Fulton Wesley C. Warren Richard K. Wilson Elaine Owens James E. Womack William J. Murphy Donna M. Muzny
... [+15 authors] ...,
Kim C. Worley
Bhanu P. Chowdhary
Richard A. Gibbs
David C. Page

First Published November 18, 2020

Paternal age in rhesus macaques is positively associated with germline mutation accumulation but not with measures of offspring sociability

Richard J. Wang
Gregg W.C. Thomas
Muthuswamy Raveendran
R. Alan Harris
Harshavardhan Doddapaneni
Donna M. Muzny
... [+1 authors] ...,
John P. Capitanio
Predrag Radivojac
Jeffrey Rogers
Matthew W. Hahn

First Published May 27, 2020

Pediatric Cancer Variant Pathogenicity Information Exchange (PeCanPIE): a cloud-based platform for curating and classifying germline variants

Michael N. Edmonson
Aman N. Patel
Dale J. Hedges
Zhaoming Wang
Evadnie Rampersaud
Chimene A. Kesserwan Xin Zhou Yanling Liu Scott Newman Michael C. Rusch Clay L. McLeod Mark R. Wilkinson Stephen V. Rice Thierry Soussi J. Paul Taylor Michael Benatar Jared B. Becksfort
... [+12 authors] ...,
Kim E. Nichols
Leslie L. Robison
James R. Downing
Jinghui Zhang

First Published August 22, 2019

Macaca mulatta) based on whole-genome sequences" > The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences

Cheng Xue
Muthuswamy Raveendran
R. Alan Harris
Gloria L. Fawcett
Xiaoming Liu
Simon White Mahmoud Dahdouli David Rio Deiros Jennifer E. Below William Salerno Laura Cox Guoping Fan Betsy Ferguson Julie Horvath Zach Johnson Sree Kanthaswamy H. Michael Kubisch Dahai Liu Michael Platt David G. Smith Binghua Sun Eric J. Vallender Feng Wang Roger W. Wiseman Rui Chen
... [+20 authors] ...,
Donna M. Muzny
Richard A. Gibbs
Fuli Yu
Jeffrey Rogers

First Published October 17, 2016

Postmortem genetic screening for the identification, verification, and reporting of genetic variants contributing to the sudden death of the young

D. Nicole R. Methner
Steven E. Scherer
Katherine Welch
Magdalena Walkiewicz
Christine M. Eng
John W. Belmont Mark C. Powell Viktoriya Korchina Harsha Vardhan Doddapaneni Donna M. Muzny
... [+5 authors] ...,
Richard A. Gibbs
Dwayne A. Wolf
Luis A. Sanchez
Roger Kahn

First Published July 19, 2016

Exonuclease mutations in DNA polymerase epsilon reveal replication strand specific mutation patterns and human origins of replication

Eve Shinbrot
Erin E. Henninger
Nils Weinhold
Kyle R. Covington
A. Yasemin Göksenin
Nikolaus Schultz Hsu Chao HarshaVardhan Doddapaneni Donna M. Muzny
... [+4 authors] ...,
Richard A. Gibbs
Chris Sander
Zachary F. Pursell
David A. Wheeler

First Published September 16, 2014

D. melanogaster modENCODE transcriptome annotation" > Comparative validation of the D. melanogaster modENCODE transcriptome annotation

Zhen-Xia Chen
David Sturgill
Jiaxin Qu
Huaiyang Jiang
Soo Park
Nathan Boley Ana Maria Suzuki Anthony R. Fletcher David C. Plachetzki Peter C. FitzGerald Carlo G. Artieri Joel Atallah Olga Barmina James B. Brown Kerstin P. Blankenburg Emily Clough Abhijit Dasgupta Sai Gubbala Yi Han Joy C. Jayaseelan Divya Kalra Yoo-Ah Kim Christie L. Kovar Sandra L. Lee Mingmei Li James D. Malley John H. Malone Tittu Mathew Nicolas R. Mattiuzzo Mala Munidasa Donna M. Muzny Fiona Ongeri Lora Perales Teresa M. Przytycka Ling-Ling Pu Garrett Robinson Rebecca L. Thornton Nehad Saada Steven E. Scherer Harold E. Smith Charles Vinson Crystal B. Warner Kim C. Worley Yuan-Qing Wu Xiaoyan Zou Peter Cherbas Manolis Kellis Michael B. Eisen Fabio Piano Karin Kionte David H. Fitch Paul W. Sternberg Asher D. Cutter Michael O. Duff Roger A. Hoskins Brenton R. Graveley Richard A. Gibbs Peter J. Bickel Artyom Kopp
... [+54 authors] ...,
Piero Carninci
Susan E. Celniker
Brian Oliver
Stephen Richards

First Published July 1, 2014

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