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Research

RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

Sumantra Chatterjee
Kameko M. Karasaki
Lauren E. Fries
Ashish Kapoor
Aravinda Chakravarti

First Published November 15, 2021

Method

Sequence-based correction of barcode bias in massively parallel reporter assays

Dongwon Lee
Ashish Kapoor
Changhee Lee
Michael Mudgett
Michael A. Beer
Aravinda Chakravarti

First Published July 20, 2021

Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

Dongwon Lee
Ashish Kapoor
Alexias Safi
Lingyun Song
Marc K. Halushka
Gregory E. Crawford
Aravinda Chakravarti

First Published August 23, 2018

Insight/Outlook

Genomic contributions to Mendelian disease

Aravinda Chakravarti

First Published May 2, 2011

LETTER

Human embryonic stem cells have a unique epigenetic signature

Marina Bibikova
Eugene Chudin
Bonnie Wu
Lixin Zhou
Eliza Wickham Garcia
Ying Liu Soojung Shin Todd W. Plaia Jonathan M. Auerbach Dan E. Arking Rodolfo Gonzalez Jeremy Crook Bruce Davidson Thomas C. Schulz Allan Robins Aparna Khanna Peter Sartipy Johan Hyllner Padmavathy Vanguri Smita Savant-Bhonsale Alan K. Smith Aravinda Chakravarti Anirban Maitra
... [+18 authors] ...,
Mahendra Rao
David L. Barker
Jeanne F. Loring
Jian-Bing Fan

First Published August 9, 2006

Methods

On the probability that a novel variant is a disease-causing mutation

Adele A. Mitchell
Aravinda Chakravarti
David J. Cutler

First Published June 17, 2005

Methods

Highly multiplexed molecular inversion probe genotyping: Over 10,000 targeted SNPs genotyped in a single tube assay

Paul Hardenbol
Fuli Yu
John Belmont
Jennifer MacKenzie
Carsten Bruckner
Tiffany Brundage Andrew Boudreau Steve Chow Jim Eberle Ayca Erbilgin Mat Falkowski Ron Fitzgerald Sy Ghose Oleg Iartchouk Maneesh Jain George Karlin-Neumann Xiuhua Lu Xin Miao Bridget Moore Martin Moorhead Eugeni Namsaraev Shiran Pasternak Eunice Prakash Karen Tran Zhiyong Wang
... [+20 authors] ...,
Hywel B. Jones
Ronald W. Davis
Thomas D. Willis
Richard A. Gibbs

First Published February 1, 2005

Methods

Haplotype and Missing Data Inference in Nuclear Families

Shin Lin
Aravinda Chakravarti
David J. Cutler

First Published July 15, 2004

Methods

SNP Discovery in Pooled Samples With Mismatch Repair Detection

Hossein Fakhrai-Rad
Jianbiao Zheng
Thomas D. Willis
Kee Wong
Kent Suyenaga
Martin Moorhead Jim Eberle Yvonne R. Thorstenson
... [+3 authors] ...,
Ted Jones
Ronald W. Davis
Eugeni Namsaraev
Malek Faham

First Published July 1, 2004

ARTICLE

Linkage Disequilibrium and Haplotype Diversity in the Genes of the Renin–Angiotensin System: Findings From the Family Blood Pressure Program

Xiaofeng Zhu
Denise Yan
Richard S. Cooper
Amy Luke
Morna A. Ikeda
Yen-Pei C. Chang
Alan Weder
Aravinda Chakravarti

First Published January 14, 2003

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