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RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

Sumantra Chatterjee
Kameko M. Karasaki
Lauren E. Fries
Ashish Kapoor
Aravinda Chakravarti

First Published November 15, 2021

Sequence-based correction of barcode bias in massively parallel reporter assays

Dongwon Lee
Ashish Kapoor
Changhee Lee
Michael Mudgett
Michael A. Beer
Aravinda Chakravarti

First Published July 20, 2021

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

Dongwon Lee
Ashish Kapoor
Alexias Safi
Lingyun Song
Marc K. Halushka
Gregory E. Crawford
Aravinda Chakravarti

First Published August 23, 2018

Mapping and characterizing N6-methyladenine in eukaryotic genomes using single-molecule real-time sequencing

Shijia Zhu
John Beaulaurier
Gintaras Deikus
Tao P. Wu
Maya Strahl
Ziyang Hao Guanzheng Luo James A. Gregory Andrew Chess Chuan He
... [+5 authors] ...,
Andrew Xiao
Robert Sebra
Eric E. Schadt
Gang Fang

First Published May 15, 2018

Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases

Eric E. Schadt
Onureena Banerjee
Gang Fang
Zhixing Feng
Wing H. Wong
Xuegong Zhang Andrey Kislyuk Tyson A. Clark Khai Luong Alona Keren-Paz Andrew Chess Vipin Kumar
... [+7 authors] ...,
Alice Chen-Plotkin
Neal Sondheimer
Jonas Korlach
Andrew Kasarskis

First Published October 23, 2012

Genomic contributions to Mendelian disease

Aravinda Chakravarti

First Published May 2, 2011

Human embryonic stem cells have a unique epigenetic signature

Marina Bibikova
Eugene Chudin
Bonnie Wu
Lixin Zhou
Eliza Wickham Garcia
Ying Liu Soojung Shin Todd W. Plaia Jonathan M. Auerbach Dan E. Arking Rodolfo Gonzalez Jeremy Crook Bruce Davidson Thomas C. Schulz Allan Robins Aparna Khanna Peter Sartipy Johan Hyllner Padmavathy Vanguri Smita Savant-Bhonsale Alan K. Smith Aravinda Chakravarti Anirban Maitra
... [+18 authors] ...,
Mahendra Rao
David L. Barker
Jeanne F. Loring
Jian-Bing Fan

First Published August 9, 2006

On the probability that a novel variant is a disease-causing mutation

Adele A. Mitchell
Aravinda Chakravarti
David J. Cutler

First Published June 17, 2005

Haplotype and Missing Data Inference in Nuclear Families

Shin Lin
Aravinda Chakravarti
David J. Cutler

First Published July 15, 2004

Linkage Disequilibrium and Haplotype Diversity in the Genes of the Renin–Angiotensin System: Findings From the Family Blood Pressure Program

Xiaofeng Zhu
Denise Yan
Richard S. Cooper
Amy Luke
Morna A. Ikeda
Yen-Pei C. Chang
Alan Weder
Aravinda Chakravarti

First Published January 14, 2003

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