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Research

Coexpression enrichment analysis at the single-cell level reveals convergent defects in neural progenitor cells and their cell-type transitions in neurodevelopmental disorders

  • Kaifang Pang
  • Li Wang
  • Wei Wang
  • Jian Zhou
  • Chao Cheng
  • Kihoon Han
  • Huda Y. Zoghbi
  • Zhandong Liu
  • First Published June 18, 2020
Research

Critical threshold levels of DNA methyltransferase 1 are required to maintain DNA methylation across the genome in human cancer cells

  • Yi Cai
  • Hsing-Chen Tsai
  • Ray-Whay Chiu Yen
  • Yang W. Zhang
  • Xiangqian Kong
  • Wei Wang
  • Limin Xia
  • Stephen B. Baylin
  • First Published February 23, 2017
Research

Impact of the X Chromosome and sex on regulatory variation

  • Kimberly R. Kukurba
  • Princy Parsana
  • Brunilda Balliu
  • Kevin S. Smith
  • Zachary Zappala
  • David A. Knowles Marie-Julie Favé Joe R. Davis Xin Li Xiaowei Zhu James B. Potash Myrna M. Weissman Jianxin Shi Anshul Kundaje Douglas F. Levinson
  • ... [+10 authors] ...,
  • Philip Awadalla
  • Sara Mostafavi
  • Alexis Battle
  • Stephen B. Montgomery
  • First Published April 21, 2016
Research

The landscape of genomic imprinting across diverse adult human tissues

  • Yael Baran
  • Meena Subramaniam
  • Anne Biton
  • Taru Tukiainen
  • Emily K. Tsang
  • Manuel A. Rivas Matti Pirinen Maria Gutierrez-Arcelus Kevin S. Smith Kim R. Kukurba Rui Zhang Celeste Eng Dara G. Torgerson Cydney Urbanek Jin Billy Li Jose R. Rodriguez-Santana Esteban G. Burchard Max A. Seibold
  • ... [+13 authors] ...,
  • Daniel G. MacArthur
  • Stephen B. Montgomery
  • Noah A. Zaitlen
  • Tuuli Lappalainen
  • First Published May 7, 2015
Research

Caenorhabditis" > Full-genome evolutionary histories of selfing, splitting, and selection in Caenorhabditis

  • Cristel G. Thomas
  • Wei Wang
  • Richard Jovelin
  • Rajarshi Ghosh
  • Tatiana Lomasko
  • Quang Trinh
  • Leonid Kruglyak
  • Lincoln D. Stein
  • Asher D. Cutter
  • First Published March 17, 2015
Research

Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

  • Alexis Battle
  • Sara Mostafavi
  • Xiaowei Zhu
  • James B. Potash
  • Myrna M. Weissman
  • Courtney McCormick Christian D. Haudenschild Kenneth B. Beckman Jianxin Shi Rui Mei
  • ... [+5 authors] ...,
  • Alexander E. Urban
  • Stephen B. Montgomery
  • Douglas F. Levinson
  • Daphne Koller
  • First Published October 3, 2013
Research

The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

  • Stephen B. Montgomery
  • David L. Goode
  • Erika Kvikstad
  • Cornelis A. Albers
  • Zhengdong D. Zhang
  • Xinmeng Jasmine Mu Guruprasad Ananda Bryan Howie Konrad J. Karczewski Kevin S. Smith Vanessa Anaya Rhea Richardson Joe Davis Daniel G. MacArthur Arend Sidow Laurent Duret Mark Gerstein
  • ... [+12 authors] ...,
  • Kateryna D. Makova
  • Jonathan Marchini
  • Gil McVean
  • Gerton Lunter
  • First Published March 11, 2013
Research

Sex-biased genetic effects on gene regulation in humans

  • Antigone S. Dimas
  • Alexandra C. Nica
  • Stephen B. Montgomery
  • Barbara E. Stranger
  • Towfique Raj
  • Alfonso Buil Thomas Giger
  • ... [+2 authors] ...,
  • Tuuli Lappalainen
  • Maria Gutierrez-Arcelus
  • Mark I. McCarthy
  • Emmanouil T. Dermitzakis
  • First Published September 7, 2012
Research

DNA methylation profiles of human active and inactive X chromosomes

  • Andrew J. Sharp
  • Elisavet Stathaki
  • Eugenia Migliavacca
  • Manisha Brahmachary
  • Stephen B. Montgomery
  • Yann Dupre
  • Stylianos E. Antonarakis
  • First Published August 23, 2011
Research

Genetic analysis of complex traits in the emerging Collaborative Cross

  • David L. Aylor
  • William Valdar
  • Wendy Foulds-Mathes
  • Ryan J. Buus
  • Ricardo A. Verdugo
  • Ralph S. Baric Martin T. Ferris Jeff A. Frelinger Mark Heise Matt B. Frieman Lisa E. Gralinski Timothy A. Bell John D. Didion Kunjie Hua Derrick L. Nehrenberg Christine L. Powell Jill Steigerwalt Yuying Xie Samir N.P. Kelada Francis S. Collins Ivana V. Yang David A. Schwartz Lisa A. Branstetter Elissa J. Chesler Darla R. Miller Jason Spence Eric Yi Liu Leonard McMillan Abhishek Sarkar Jeremy Wang Wei Wang Qi Zhang Karl W. Broman Ron Korstanje Caroline Durrant Richard Mott Fuad A. Iraqi
  • ... [+32 authors] ...,
  • Daniel Pomp
  • David Threadgill
  • Fernando Pardo-Manuel de Villena
  • Gary A. Churchill
  • First Published March 15, 2011
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