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Research

Comprehensive analysis of structural variants in breast cancer genomes using single-molecule sequencing

  • Sergey Aganezov
  • Sara Goodwin
  • Rachel M. Sherman
  • Fritz J. Sedlazeck
  • Gayatri Arun
  • Sonam Bhatia Isac Lee Melanie Kirsche Robert Wappel Melissa Kramer Karen Kostroff
  • ... [+6 authors] ...,
  • David L. Spector
  • Winston Timp
  • W. Richard McCombie
  • Michael C. Schatz
  • First Published September 4, 2020
Research

Human papillomavirus and the landscape of secondary genetic alterations in oral cancers

  • Maura L. Gillison
  • Keiko Akagi
  • Weihong Xiao
  • Bo Jiang
  • Robert K.L. Pickard
  • Jingfeng Li Benjamin J. Swanson Amit D. Agrawal Mark Zucker Birgit Stache-Crain Anne-Katrin Emde
  • ... [+6 authors] ...,
  • Heather M. Geiger
  • Nicolas Robine
  • Kevin R. Coombes
  • David E. Symer
  • First Published December 18, 2018
Research

Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line

  • Maria Nattestad
  • Sara Goodwin
  • Karen Ng
  • Timour Baslan
  • Fritz J. Sedlazeck
  • Philipp Rescheneder Tyler Garvin Han Fang James Gurtowski Elizabeth Hutton Elizabeth Tseng Chen-Shan Chin Timothy Beck Yogi Sundaravadanam Melissa Kramer Eric Antoniou
  • ... [+11 authors] ...,
  • John D. McPherson
  • James Hicks
  • W. Richard McCombie
  • Michael C. Schatz
  • First Published June 28, 2018
Research

Genome-wide analysis of HPV integration in human cancers reveals recurrent, focal genomic instability

  • Keiko Akagi
  • Jingfeng Li
  • Tatevik R. Broutian
  • Hesed Padilla-Nash
  • Weihong Xiao
  • Bo Jiang James W. Rocco Theodoros N. Teknos Bhavna Kumar Danny Wangsa
  • ... [+5 authors] ...,
  • Dandan He
  • Thomas Ried
  • David E. Symer
  • Maura L. Gillison
  • First Published November 7, 2013
Research

The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA

  • Michael Regulski
  • Zhenyuan Lu
  • Jude Kendall
  • Mark T.A. Donoghue
  • Jon Reinders
  • Victor Llaca Stephane Deschamps Andrew Smith Dan Levy W. Richard McCombie Scott Tingey
  • ... [+6 authors] ...,
  • Antoni Rafalski
  • James Hicks
  • Doreen Ware
  • Robert A. Martienssen
  • First Published June 5, 2013
Research

Mouse endogenous retroviruses can trigger premature transcriptional termination at a distance

  • Jingfeng Li
  • Keiko Akagi
  • Yongjun Hu
  • Anna L. Trivett
  • Christopher J.W. Hlynialuk
  • Deborah A. Swing Natalia Volfovsky Tamara C. Morgan
  • ... [+3 authors] ...,
  • Yelena Golubeva
  • Robert M. Stephens
  • David E. Smith
  • David E. Symer
  • First Published February 23, 2012
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