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Research

Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands

  • Brian S. Roberts
  • E. Christopher Partridge
  • Bryan A. Moyers
  • Vikram Agarwal
  • Kimberly M. Newberry
  • Beth K. Martin
  • Jay Shendure
  • Richard M. Myers
  • Gregory M. Cooper
  • First Published April 20, 2021
Research

Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology" > Suppressor mutations in Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology

  • Adebola Enikanolaiye
  • Julie Ruston
  • Rong Zeng
  • Christine Taylor
  • Marijke Schrock
  • Christie M. Buchovecky
  • Jay Shendure
  • Elif Acar
  • Monica J. Justice
  • First Published April 21, 2020
Research

Small chromosomal regions position themselves autonomously according to their chromatin class

  • Harmen J.G. van de Werken
  • Josien C. Haan
  • Yana Feodorova
  • Dominika Bijos
  • An Weuts
  • Koen Theunis Sjoerd J.B. Holwerda Wouter Meuleman Ludo Pagie Katharina Thanisch Parveen Kumar Heinrich Leonhardt Peter Marynen Bas van Steensel
  • ... [+9 authors] ...,
  • Thierry Voet
  • Wouter de Laat
  • Irina Solovei
  • Boris Joffe
  • First Published March 24, 2017
Research

A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity

  • Fumitaka Inoue
  • Martin Kircher
  • Beth Martin
  • Gregory M. Cooper
  • Daniela M. Witten
  • Michael T. McManus
  • Nadav Ahituv
  • Jay Shendure
  • First Published November 9, 2016
Research

Exome sequencing reveals pathogenic mutations in 91 strains of mice with Mendelian disorders

  • Heather Fairfield
  • Anuj Srivastava
  • Guruprasad Ananda
  • Rangjiao Liu
  • Martin Kircher
  • Anuradha Lakshminarayana Belinda S. Harris Son Yong Karst Louise A. Dionne Coleen C. Kane Michelle Curtain Melissa L. Berry Patricia F. Ward-Bailey Ian Greenstein Candice Byers Anne Czechanski Jocelyn Sharp Kristina Palmer Polyxeni Gudis Whitney Martin Abby Tadenev Laurent Bogdanik C. Herbert Pratt Bo Chang David G. Schroeder Gregory A. Cox Paul Cliften Jeffrey Milbrandt Stephen Murray Robert Burgess David E. Bergstrom Leah Rae Donahue Hanan Hamamy Amira Masri Federico A. Santoni
  • ... [+30 authors] ...,
  • Periklis Makrythanasis
  • Stylianos E. Antonarakis
  • Jay Shendure
  • Laura G. Reinholdt
  • First Published April 27, 2015
Research

Escherichia coli strains" > Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains

  • Stephen J. Salipante
  • David J. Roach
  • Jacob O. Kitzman
  • Matthew W. Snyder
  • Bethany Stackhouse
  • Susan M. Butler-Wu
  • Choli Lee
  • Brad T. Cookson
  • Jay Shendure
  • First Published November 4, 2014
Research

Constitutive nuclear lamina–genome interactions are highly conserved and associated with A/T-rich sequence

  • Wouter Meuleman
  • Daan Peric-Hupkes
  • Jop Kind
  • Jean-Bernard Beaudry
  • Ludo Pagie
  • Manolis Kellis
  • Marcel Reinders
  • Lodewyk Wessels
  • Bas van Steensel
  • First Published November 2, 2012
Research

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

  • Mario Ventura
  • Claudia R. Catacchio
  • Can Alkan
  • Tomas Marques-Bonet
  • Saba Sajjadian
  • Tina A. Graves Fereydoun Hormozdiari Arcadi Navarro Maika Malig Carl Baker Choli Lee Emily H. Turner Lin Chen Jeffrey M. Kidd
  • ... [+9 authors] ...,
  • Nicoletta Archidiacono
  • Jay Shendure
  • Richard K. Wilson
  • Evan E. Eichler
  • First Published June 17, 2011
Research

Global survey of escape from X inactivation by RNA-sequencing in mouse

  • Fan Yang
  • Tomas Babak
  • Jay Shendure
  • Christine M. Disteche
  • First Published April 2, 2010
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