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Research

Genome-wide promoter assembly in E. coli measured at single-base resolution

  • Jordan John
  • Javaid Jabbar
  • Nitika Badjatia
  • Matthew J. Rossi
  • William K.M. Lai
  • B. Franklin Pugh
  • First Published April 28, 2022
Research

Genome-wide determinants of sequence-specific DNA binding of general regulatory factors

  • Matthew J. Rossi
  • William K.M. Lai
  • B. Franklin Pugh
  • First Published March 21, 2018
Research

Widespread and precise reprogramming of yeast protein–genome interactions in response to heat shock

  • Vinesh Vinayachandran
  • Rohit Reja
  • Matthew J. Rossi
  • Bongsoo Park
  • Lila Rieber
  • Chitvan Mittal
  • Shaun Mahony
  • B. Franklin Pugh
  • First Published February 14, 2018
Research

Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion

  • James Hadfield
  • Simon R. Harris
  • Helena M.B. Seth-Smith
  • Surendra Parmar
  • Patiyan Andersson
  • Philip M. Giffard Julius Schachter Jeanne Moncada Louise Ellison María Lucía Gallo Vaulet Marcelo Rodríguez Fermepin Frans Radebe Suyapa Mendoza Sander Ouburg Servaas A. Morré Konrad Sachse Mirja Puolakkainen Suvi J. Korhonen Chris Sonnex Rebecca Wiggins Hamid Jalal Tamara Brunelli Patrizia Casprini Rachel Pitt Cathy Ison Alevtina Savicheva Elena Shipitsyna Ronza Hadad Laszlo Kari Matthew J. Burton David Mabey Anthony W. Solomon David Lewis Peter Marsh
  • ... [+29 authors] ...,
  • Magnus Unemo
  • Ian N. Clarke
  • Julian Parkhill
  • Nicholas R. Thomson
  • First Published June 6, 2017
Research

Genome-wide uniformity of human ‘open’ pre-initiation complexes

  • William K.M. Lai
  • B. Franklin Pugh
  • First Published November 10, 2016
Research

Unusual combinatorial involvement of poly-A/T tracts in organizing genes and chromatin in Dictyostelium

  • Gue Su Chang
  • Angelika A. Noegel
  • Travis N. Mavrich
  • Rolf Müller
  • Lynn Tomsho
  • Elissa Ward Marius Felder Cizhong Jiang
  • ... [+3 authors] ...,
  • Ludwig Eichinger
  • Gernot Glöckner
  • Stephan C. Schuster
  • B. Franklin Pugh
  • First Published March 20, 2012
Research

Variety of genomic DNA patterns for nucleosome positioning

  • Ilya Ioshikhes
  • Sergey Hosid
  • B. Franklin Pugh
  • First Published July 12, 2011
Research

Stable and dynamic nucleosome states during a meiotic developmental process

  • Liye Zhang
  • Hong Ma
  • B. Franklin Pugh
  • First Published April 22, 2011
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