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Research

Locus-resolution analysis of L1 regulation and retrotransposition potential in mouse embryonic development

  • Patricia Gerdes
  • Dorothy Chan
  • Mischa Lundberg
  • Francisco J. Sanchez-Luque
  • Gabriela O. Bodea
  • Adam D. Ewing
  • Geoffrey J. Faulkner
  • Sandra R. Richardson
  • First Published October 5, 2023
Research

Somatic retrotransposition in the developing rhesus macaque brain

  • Victor Billon
  • Francisco J. Sanchez-Luque
  • Jay Rasmussen
  • Gabriela O. Bodea
  • Daniel J. Gerhardt
  • Patricia Gerdes Seth W. Cheetham Stephanie N. Schauer Prabha Ajjikuttira Thomas J. Meyer Cora E. Layman Kimberly A. Nevonen Natasha Jansz Jose L. Garcia-Perez
  • ... [+9 authors] ...,
  • Sandra R. Richardson
  • Adam D. Ewing
  • Lucia Carbone
  • Geoffrey J. Faulkner
  • First Published June 21, 2022
Research

A hidden layer of structural variation in transposable elements reveals potential genetic modifiers in human disease-risk loci

  • Elisabeth J. van Bree
  • Rita L.F.P. Guimarães
  • Mischa Lundberg
  • Elena R. Blujdea
  • Jimi L. Rosenkrantz
  • Fred T.G. White Josse Poppinga Paula Ferrer-Raventós Anne-Fleur E. Schneider Isabella Clayton David Haussler Marcel J.T. Reinders
  • ... [+7 authors] ...,
  • Henne Holstege
  • Adam D. Ewing
  • Colette Moses
  • Frank M.J. Jacobs
  • First Published March 24, 2022
Research

L1 retrotransposition is a common feature of mammalian hepatocarcinogenesis

  • Stephanie N. Schauer
  • Patricia E. Carreira
  • Ruchi Shukla
  • Daniel J. Gerhardt
  • Patricia Gerdes
  • Francisco J. Sanchez-Luque Paola Nicoli Michaela Kindlova Serena Ghisletti Alexandre Dos Santos Delphine Rapoud Didier Samuel
  • ... [+7 authors] ...,
  • Jamila Faivre
  • Adam D. Ewing
  • Sandra R. Richardson
  • Geoffrey J. Faulkner
  • First Published April 11, 2018
Research

Heritable L1 retrotransposition in the mouse primordial germline and early embryo

  • Sandra R. Richardson
  • Patricia Gerdes
  • Daniel J. Gerhardt
  • Francisco J. Sanchez-Luque
  • Gabriela-Oana Bodea
  • Martin Muñoz-Lopez J. Samuel Jesuadian Marie-Jeanne H.C. Kempen Patricia E. Carreira Jeffrey A. Jeddeloh
  • ... [+5 authors] ...,
  • Jose L. Garcia-Perez
  • Haig H. Kazazian
  • Adam D. Ewing
  • Geoffrey J. Faulkner
  • First Published May 8, 2017
Research

Widespread somatic L1 retrotransposition occurs early during gastrointestinal cancer evolution

  • Adam D. Ewing
  • Anthony Gacita
  • Laura D. Wood
  • Florence Ma
  • Dongmei Xing
  • Min-Sik Kim Srikanth S. Manda Gabriela Abril Gavin Pereira Alvin Makohon-Moore Leendert H.J. Looijenga Ad J.M. Gillis Ralph H. Hruban Robert A. Anders Katharine E. Romans Akhilesh Pandey Christine A. Iacobuzio-Donahue
  • ... [+12 authors] ...,
  • Bert Vogelstein
  • Kenneth W. Kinzler
  • Haig H. Kazazian
  • Szilvia Solyom
  • First Published August 10, 2015
Research

Divergent functions of hematopoietic transcription factors in lineage priming and differentiation during erythro-megakaryopoiesis

  • Maxim Pimkin
  • Andrew V. Kossenkov
  • Tejaswini Mishra
  • Christapher S. Morrissey
  • Weisheng Wu
  • Cheryl A. Keller Gerd A. Blobel
  • ... [+2 authors] ...,
  • Dongwon Lee
  • Michael A. Beer
  • Ross C. Hardison
  • Mitchell J. Weiss
  • First Published October 15, 2014
Research

Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis

  • Weisheng Wu
  • Christapher S. Morrissey
  • Cheryl A. Keller
  • Tejaswini Mishra
  • Maxim Pimkin
  • Gerd A. Blobel
  • Mitchell J. Weiss
  • Ross C. Hardison
  • First Published October 15, 2014
Research

Extensive somatic L1 retrotransposition in colorectal tumors

  • Szilvia Solyom
  • Adam D. Ewing
  • Eric P. Rahrmann
  • Tara Doucet
  • Heather H. Nelson
  • Michael B. Burns Reuben S. Harris David F. Sigmon Alex Casella Bracha Erlanger Sarah Wheelan Kyle R. Upton
  • ... [+7 authors] ...,
  • Ruchi Shukla
  • Geoffrey J. Faulkner
  • David A. Largaespada
  • Haig H. Kazazian
  • First Published September 11, 2012
Research

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

  • Weisheng Wu
  • Yong Cheng
  • Cheryl A. Keller
  • Jason Ernst
  • Swathi Ashok Kumar
  • Tejaswini Mishra Christapher Morrissey Christine M. Dorman Kuan-Bei Chen Daniela Drautz Belinda Giardine Yoichiro Shibata Lingyun Song Max Pimkin Gregory E. Crawford Terrence S. Furey Manolis Kellis Webb Miller James Taylor Stephan C. Schuster Yu Zhang
  • ... [+16 authors] ...,
  • Francesca Chiaromonte
  • Gerd A. Blobel
  • Mitchell J. Weiss
  • Ross C. Hardison
  • First Published July 27, 2011
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