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MEDME: An experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment

Mattia Pelizzola
Yasuo Koga
Alexander Eckehart Urban
Michael Krauthammer
Sherman Weissman
Ruth Halaban
Annette M. Molinaro

First Published September 2, 2008

Mapping of transcription factor binding regions in mammalian cells by ChIP: Comparison of array- and sequencing-based technologies

Ghia M. Euskirchen
Joel S. Rozowsky
Chia-Lin Wei
Wah Heng Lee
Zhengdong D. Zhang
Stephen Hartman Olof Emanuelsson Viktor Stolc
... [+3 authors] ...,
Sherman Weissman
Mark B. Gerstein
Yijun Ruan
Michael Snyder

First Published June 13, 2007

What is a gene, post-ENCODE? History and updated definition

Mark B. Gerstein
Can Bruce
Joel S. Rozowsky
Deyou Zheng
Jiang Du
Jan O. Korbel
... [+1 authors] ...,
Olof Emanuelsson
Zhengdong D. Zhang
Sherman Weissman
Michael Snyder

First Published June 13, 2007

Caenorhabditis elegans: Toward a knockout for every gene" > Efficient target-selected mutagenesis in Caenorhabditis elegans: Toward a knockout for every gene

Edwin Cuppen
Eelke Gort
Esther Hazendonk
Josine Mudde
José van de Belt
Isaäc J. Nijman
Victor Guryev
Ronald H.A. Plasterk

First Published April 6, 2007

Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome

Olof Emanuelsson
Ugrappa Nagalakshmi
Deyou Zheng
Joel S. Rozowsky
Alexander E. Urban
Jiang Du Zheng Lian
... [+2 authors] ...,
Viktor Stolc
Sherman Weissman
Michael Snyder
Mark B. Gerstein

First Published November 21, 2006

Single Nucleotide Polymorphisms Associated With Rat Expressed Sequences

Victor Guryev
Eugene Berezikov
Rainer Malik
Ronald H.A. Plasterk
Edwin Cuppen

First Published July 1, 2004

CONREAL: Conserved Regulatory Elements Anchored Alignment Algorithm for Identification of Transcription Factor Binding Sites by Phylogenetic Footprinting

Eugene Berezikov
Victor Guryev
Ronald H.A. Plasterk
Edwin Cuppen

First Published December 12, 2003