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Methods

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

  • Ryan D. Morin
  • Michael D. O’Connor
  • Malachi Griffith
  • Florian Kuchenbauer
  • Allen Delaney
  • Anna-Liisa Prabhu Yongjun Zhao Helen McDonald
  • ... [+3 authors] ...,
  • Thomas Zeng
  • Martin Hirst
  • Connie J. Eaves
  • Marco A. Marra
  • First Published February 19, 2008
Methods

Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines

  • Jaswinder Khattra
  • Allen D. Delaney
  • Yongjun Zhao
  • Asim Siddiqui
  • Jennifer Asano
  • Helen McDonald Pawan Pandoh Noreen Dhalla Anna-liisa Prabhu Kevin Ma Stephanie Lee Adrian Ally Angela Tam Danne Sa Sean Rogers David Charest Jeff Stott Scott Zuyderduyn Richard Varhol Connie Eaves Steven Jones
  • ... [+16 authors] ...,
  • Robert Holt
  • Martin Hirst
  • Pamela A. Hoodless
  • Marco A. Marra
  • First Published November 29, 2006
Methods

Physical map-assisted whole-genome shotgun sequence assemblies

  • René L. Warren
  • Dmitry Varabei
  • Darren Platt
  • Xiaoqiu Huang
  • David Messina
  • Shiaw-Pyng Yang James W. Kronstad Martin Krzywinski Wesley C. Warren John W. Wallis LaDeana W. Hillier Asif T. Chinwalla Jacqueline E. Schein
  • ... [+8 authors] ...,
  • Asim S. Siddiqui
  • Marco A. Marra
  • Richard K. Wilson
  • Steven J.M. Jones
  • First Published June 1, 2006
RESOURCE

Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling" > Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling

  • Ryan D. Morin
  • Elbert Chang
  • Anca Petrescu
  • Nancy Liao
  • Malachi Griffith
  • Robert Kirkpatrick Yaron S. Butterfield Alice C. Young Jeffrey Stott Sarah Barber Ryan Babakaiff Mark C. Dickson Corey Matsuo David Wong George S. Yang Duane E. Smailus Keith D. Wetherby Peggy N. Kwong Jane Grimwood Charles P. Brinkley Mabel Brown-John Natalie D. Reddix-Dugue Michael Mayo Jeremy Schmutz Jaclyn Beland Morgan Park Susan Gibson Teika Olson Gerard G. Bouffard Miranda Tsai Ruth Featherstone Steve Chand Asim S. Siddiqui Wonhee Jang Ed Lee Steven L. Klein Robert W. Blakesley Barry R. Zeeberg Sudarshan Narasimhan John N. Weinstein Christa Prange Pennacchio Richard M. Myers Eric D. Green Lukas Wagner
  • ... [+39 authors] ...,
  • Daniela S. Gerhard
  • Marco A. Marra
  • Steven J.M. Jones
  • Robert A. Holt
  • First Published May 3, 2006
RESOURCE

Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza" > The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza

  • Jetty S.S. Ammiraju
  • Meizhong Luo
  • José L. Goicoechea
  • Wenming Wang
  • Dave Kudrna
  • Christopher Mueller Jayson Talag HyeRan Kim Nicholas B. Sisneros Barbara Blackmon Eric Fang Jeffery B. Tomkins Darshan Brar David MacKill Susan McCouch Nori Kurata Georgina Lambert David W. Galbraith K. Arumuganathan Kiran Rao Jason G. Walling Navdeep Gill Yeisoo Yu
  • ... [+18 authors] ...,
  • Phillip SanMiguel
  • Carol Soderlund
  • Scott Jackson
  • Rod A. Wing
  • First Published December 12, 2005
RESOURCE

Development and Application of a Salmonid EST Database and cDNA Microarray: Data Mining and Interspecific Hybridization Characteristics

  • Matthew L. Rise
  • Kristian R. von Schalburg
  • Gordon D. Brown
  • Melanie A. Mawer
  • Robert H. Devlin
  • Nathanael Kuipers Maura Busby Marianne Beetz-Sargent Roberto Alberto A. Ross Gibbs Peter Hunt Robert Shukin Jeffrey A. Zeznik Colleen Nelson Simon R.M. Jones Duane E. Smailus Steven J.M. Jones Jacqueline E. Schein Marco A. Marra Yaron S.N. Butterfield
  • ... [+15 authors] ...,
  • Jeff M. Stott
  • Siemon H.S. Ng
  • William S. Davidson
  • Ben F. Koop
  • First Published February 12, 2004
RESOURCE

Internet Contig Explorer (iCE)—A Tool for Visualizing Clone Fingerprint Maps

  • Christopher D. Fjell
  • Ian Bosdet
  • Jacqueline E. Schein
  • Steven J.M. Jones
  • Marco A. Marra
  • First Published June 1, 2003
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