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An MCMC algorithm for haplotype assembly from whole-genome sequence data

Vikas Bansal
Aaron L. Halpern
Nelson Axelrod
Vineet Bafna

First Published August 1, 2008

Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes

Nitin Gupta
Jamal Benhamida
Vipul Bhargava
Daniel Goodman
Elisabeth Kain
Ian Kerman Ngan Nguyen Noah Ollikainen Jesse Rodriguez Jian Wang Mary S. Lipton
... [+6 authors] ...,
Margaret Romine
Vineet Bafna
Richard D. Smith
Pavel A. Pevzner

First Published April 21, 2008

Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation

Nitin Gupta
Stephen Tanner
Navdeep Jaitly
Joshua N. Adkins
Mary Lipton
Robert Edwards Margaret Romine
... [+2 authors] ...,
Andrei Osterman
Vineet Bafna
Richard D. Smith
Pavel A. Pevzner

First Published August 9, 2007

Improving gene annotation using peptide mass spectrometry

Stephen Tanner
Zhouxin Shen
Julio Ng
Liliana Florea
Roderic Guigó
Steven P. Briggs
Vineet Bafna

First Published December 22, 2006

Evidence for large inversion polymorphisms in the human genome from HapMap data

Vikas Bansal
Ali Bashir
Vineet Bafna

First Published December 21, 2006

Accurate and reliable high-throughput detection of copy number variation in the human genome

Heike Fiegler
Richard Redon
Dan Andrews
Carol Scott
Robert Andrews
Carol Carder Richard Clark Oliver Dovey Peter Ellis Lars Feuk Lisa French Paul Hunt Dimitrios Kalaitzopoulos James Larkin Lyndal Montgomery George H. Perry Bob W. Plumb Keith Porter Rachel E. Rigby Diane Rigler Armand Valsesia Cordelia Langford Sean J. Humphray
... [+18 authors] ...,
Stephen W. Scherer
Charles Lee
Matthew E. Hurles
Nigel P. Carter

First Published November 22, 2006