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EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

  • First Published November 24, 2008

Enredo and Pecan: Genome-wide mammalian consistency-based multiple alignment with paralogs

  • First Published October 10, 2008

Genome-wide nucleotide-level mammalian ancestor reconstruction

  • First Published October 10, 2008

Confounding between recombination and selection, and the Ped/Pop method for detecting selection

  • First Published July 10, 2008

An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)

  • First Published June 24, 2008

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

  • First Published March 18, 2008

Identification of novel peptide hormones in the human proteome by hidden Markov model screening

  • First Published February 6, 2007

The Ensembl Core Software Libraries

  • First Published May 3, 2004

Sockeye: A 3D Environment for Comparative Genomics

  • First Published May 3, 2004

GeneWise and Genomewise

  • First Published May 3, 2004
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