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Targeted discovery of novel human exons by comparative genomics

Adam Siepel
Mark Diekhans
Broňa Brejová
Laura Langton
Michael Stevens
Charles L.G. Comstock Colleen Davis Brent Ewing Shelly Oommen Christopher Lau Hung-Chun Yu Jianfeng Li Bruce A. Roe Phil Green
... [+9 authors] ...,
Daniela S. Gerhard
Gary Temple
David Haussler
Michael R. Brent

First Published November 7, 2007

Conrad: Gene prediction using conditional random fields

David DeCaprio
Jade P. Vinson
Matthew D. Pearson
Philip Montgomery
Matthew Doherty
James E. Galagan

First Published August 9, 2007

A tale of two templates: Automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices

Aaron E. Tenney
Jia Qian Wu
Laura Langton
Paul Klueh
Ralph Quatrano
Michael R. Brent

First Published January 8, 2007

Iterative gene prediction and pseudogene removal improves genome annotation

Marijke J. van Baren
Michael R. Brent

First Published May 1, 2006

Genome annotation past, present, and future: How to define an ORF at each locus

Michael R. Brent

First Published December 8, 2005

Begin at the beginning: Predicting genes with 5′ UTRs

Randall H. Brown
Samuel S. Gross
Michael R. Brent

First Published May 2, 2005

C. elegans ORFeome by cloning TWINSCAN predictions" > Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions

Chaochun Wei
Philippe Lamesch
Manimozhiyan Arumugam
Jennifer Rosenberg
Ping Hu
Marc Vidal
Michael R. Brent

First Published April 1, 2005