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MEDME: An experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment

  • Mattia Pelizzola
  • Yasuo Koga
  • Alexander Eckehart Urban
  • Michael Krauthammer
  • Sherman Weissman
  • Ruth Halaban
  • Annette M. Molinaro
  • First Published September 2, 2008

Mapping of transcription factor binding regions in mammalian cells by ChIP: Comparison of array- and sequencing-based technologies

  • Ghia M. Euskirchen
  • Joel S. Rozowsky
  • Chia-Lin Wei
  • Wah Heng Lee
  • Zhengdong D. Zhang
  • Stephen Hartman Olof Emanuelsson Viktor Stolc
  • ... [+3 authors] ...,
  • Sherman Weissman
  • Mark B. Gerstein
  • Yijun Ruan
  • Michael Snyder
  • First Published June 13, 2007

What is a gene, post-ENCODE? History and updated definition

  • Mark B. Gerstein
  • Can Bruce
  • Joel S. Rozowsky
  • Deyou Zheng
  • Jiang Du
  • Jan O. Korbel
  • ... [+1 authors] ...,
  • Olof Emanuelsson
  • Zhengdong D. Zhang
  • Sherman Weissman
  • Michael Snyder
  • First Published June 13, 2007

Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome

  • Olof Emanuelsson
  • Ugrappa Nagalakshmi
  • Deyou Zheng
  • Joel S. Rozowsky
  • Alexander E. Urban
  • Jiang Du Zheng Lian
  • ... [+2 authors] ...,
  • Viktor Stolc
  • Sherman Weissman
  • Michael Snyder
  • Mark B. Gerstein
  • First Published November 21, 2006

An atlas of human gene expression from massively parallel signature sequencing (MPSS)

  • C. Victor Jongeneel
  • Mauro Delorenzi
  • Christian Iseli
  • Daixing Zhou
  • Christian D. Haudenschild
  • Irina Khrebtukova Dmitry Kuznetsov
  • ... [+2 authors] ...,
  • Brian J. Stevenson
  • Robert L. Strausberg
  • Andrew J.G. Simpson
  • Thomas J. Vasicek
  • First Published July 5, 2005
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