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Methods

Physical map-assisted whole-genome shotgun sequence assemblies

  • René L. Warren
  • Dmitry Varabei
  • Darren Platt
  • Xiaoqiu Huang
  • David Messina
  • Shiaw-Pyng Yang James W. Kronstad Martin Krzywinski Wesley C. Warren John W. Wallis LaDeana W. Hillier Asif T. Chinwalla Jacqueline E. Schein
  • ... [+8 authors] ...,
  • Asim S. Siddiqui
  • Marco A. Marra
  • Richard K. Wilson
  • Steven J.M. Jones
  • First Published June 1, 2006
RESOURCE

Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling" > Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling

  • Ryan D. Morin
  • Elbert Chang
  • Anca Petrescu
  • Nancy Liao
  • Malachi Griffith
  • Robert Kirkpatrick Yaron S. Butterfield Alice C. Young Jeffrey Stott Sarah Barber Ryan Babakaiff Mark C. Dickson Corey Matsuo David Wong George S. Yang Duane E. Smailus Keith D. Wetherby Peggy N. Kwong Jane Grimwood Charles P. Brinkley Mabel Brown-John Natalie D. Reddix-Dugue Michael Mayo Jeremy Schmutz Jaclyn Beland Morgan Park Susan Gibson Teika Olson Gerard G. Bouffard Miranda Tsai Ruth Featherstone Steve Chand Asim S. Siddiqui Wonhee Jang Ed Lee Steven L. Klein Robert W. Blakesley Barry R. Zeeberg Sudarshan Narasimhan John N. Weinstein Christa Prange Pennacchio Richard M. Myers Eric D. Green Lukas Wagner
  • ... [+39 authors] ...,
  • Daniela S. Gerhard
  • Marco A. Marra
  • Steven J.M. Jones
  • Robert A. Holt
  • First Published May 3, 2006
ENSEMBL Special

Sockeye: A 3D Environment for Comparative Genomics

  • Stephen B. Montgomery
  • Tamara Astakhova
  • Mikhail Bilenky
  • Ewan Birney
  • Tony Fu
  • Maik Hassel Craig Melsopp Marcin Rak
  • ... [+3 authors] ...,
  • A. Gordon Robertson
  • Monica Sleumer
  • Asim S. Siddiqui
  • Steven J.M. Jones
  • First Published May 3, 2004
RESOURCE

Development and Application of a Salmonid EST Database and cDNA Microarray: Data Mining and Interspecific Hybridization Characteristics

  • Matthew L. Rise
  • Kristian R. von Schalburg
  • Gordon D. Brown
  • Melanie A. Mawer
  • Robert H. Devlin
  • Nathanael Kuipers Maura Busby Marianne Beetz-Sargent Roberto Alberto A. Ross Gibbs Peter Hunt Robert Shukin Jeffrey A. Zeznik Colleen Nelson Simon R.M. Jones Duane E. Smailus Steven J.M. Jones Jacqueline E. Schein Marco A. Marra Yaron S.N. Butterfield
  • ... [+15 authors] ...,
  • Jeff M. Stott
  • Siemon H.S. Ng
  • William S. Davidson
  • Ben F. Koop
  • First Published February 12, 2004
RESOURCE

Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans

  • Suraj Peri
  • J. Daniel Navarro
  • Ramars Amanchy
  • Troels Z. Kristiansen
  • Chandra Kiran Jonnalagadda
  • Vineeth Surendranath Vidya Niranjan Babylakshmi Muthusamy T.K.B. Gandhi Mads Gronborg Nieves Ibarrola Nandan Deshpande K. Shanker H.N. Shivashankar B.P. Rashmi M.A. Ramya Zhixing Zhao K.N. Chandrika N. Padma H.C. Harsha A.J. Yatish M.P. Kavitha Minal Menezes Dipanwita Roy Choudhury Shubha Suresh Neelanjana Ghosh R. Saravana Sreenath Chandran Subhalakshmi Krishna Mary Joy Sanjeev K. Anand V. Madavan Ansamma Joseph Guang W. Wong William P. Schiemann Stefan N. Constantinescu Lily Huang Roya Khosravi-Far Hanno Steen Muneesh Tewari Saghi Ghaffari Gerard C. Blobe Chi V. Dang Joe G.N. Garcia Jonathan Pevsner Ole N. Jensen Peter Roepstorff Krishna S. Deshpande
  • ... [+43 authors] ...,
  • Arul M. Chinnaiyan
  • Ada Hamosh
  • Aravinda Chakravarti
  • Akhilesh Pandey
  • First Published October 2, 2003
RESOURCE

Internet Contig Explorer (iCE)—A Tool for Visualizing Clone Fingerprint Maps

  • Christopher D. Fjell
  • Ian Bosdet
  • Jacqueline E. Schein
  • Steven J.M. Jones
  • Marco A. Marra
  • First Published June 1, 2003
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