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Methods

Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes

Nitin Gupta
Jamal Benhamida
Vipul Bhargava
Daniel Goodman
Elisabeth Kain
Ian Kerman Ngan Nguyen Noah Ollikainen Jesse Rodriguez Jian Wang Mary S. Lipton
... [+6 authors] ...,
Margaret Romine
Vineet Bafna
Richard D. Smith
Pavel A. Pevzner

First Published April 21, 2008

Methods

Short read fragment assembly of bacterial genomes

Mark J. Chaisson
Pavel A. Pevzner

First Published December 14, 2007

Methods

Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation

Nitin Gupta
Stephen Tanner
Navdeep Jaitly
Joshua N. Adkins
Mary Lipton
Robert Edwards Margaret Romine
... [+2 authors] ...,
Andrei Osterman
Vineet Bafna
Richard D. Smith
Pavel A. Pevzner

First Published August 9, 2007

Methods

Decoding the fine-scale structure of a breast cancer genome and transcriptome

Stanislav Volik
Benjamin J. Raphael
Guiqing Huang
Michael R. Stratton
Graham Bignel
John Murnane John H. Brebner Krystyna Bajsarowicz Pamela L. Paris Quanzhou Tao David Kowbel Anna Lapuk Dmitri A. Shagin Irina A. Shagina Joe W. Gray
... [+10 authors] ...,
Jan-Fang Cheng
Pieter J. de Jong
Pavel Pevzner
Colin Collins

First Published February 3, 2006

Methods

High-Resolution Analysis of DNA Copy Number Using Oligonucleotide Microarrays

Graham R. Bignell
Jing Huang
Joel Greshock
Stephen Watt
Adam Butler
Sofie West Mira Grigorova Keith W. Jones Wen Wei Michael R. Stratton
... [+5 authors] ...,
P. Andrew Futreal
Barbara Weber
Michael H. Shapero
Richard Wooster

First Published February 2, 2004