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Methods

Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding

  • Kevin Judd McKernan
  • Heather E. Peckham
  • Gina L. Costa
  • Stephen F. McLaughlin
  • Yutao Fu
  • Eric F. Tsung Christopher R. Clouser Cisyla Duncan Jeffrey K. Ichikawa Clarence C. Lee Zheng Zhang Swati S. Ranade Eileen T. Dimalanta Fiona C. Hyland Tanya D. Sokolsky Lei Zhang Andrew Sheridan Haoning Fu Cynthia L. Hendrickson Bin Li Lev Kotler Jeremy R. Stuart Joel A. Malek Jonathan M. Manning Alena A. Antipova Damon S. Perez Michael P. Moore Kathleen C. Hayashibara Michael R. Lyons Robert E. Beaudoin Brittany E. Coleman Michael W. Laptewicz Adam E. Sannicandro Michael D. Rhodes Rajesh K. Gottimukkala Shan Yang Vineet Bafna Ali Bashir Andrew MacBride Can Alkan Jeffrey M. Kidd
  • ... [+36 authors] ...,
  • Evan E. Eichler
  • Martin G. Reese
  • Francisco M. De La Vega
  • Alan P. Blanchard
  • First Published June 22, 2009
Methods

Enredo and Pecan: Genome-wide mammalian consistency-based multiple alignment with paralogs

  • Benedict Paten
  • Javier Herrero
  • Kathryn Beal
  • Stephen Fitzgerald
  • Ewan Birney
  • First Published October 10, 2008
Methods

Genome-wide nucleotide-level mammalian ancestor reconstruction

  • Benedict Paten
  • Javier Herrero
  • Stephen Fitzgerald
  • Kathryn Beal
  • Paul Flicek
  • Ian Holmes
  • Ewan Birney
  • First Published October 10, 2008
Methods

Evidence for large inversion polymorphisms in the human genome from HapMap data

  • Vikas Bansal
  • Ali Bashir
  • Vineet Bafna
  • First Published December 21, 2006
Methods

Orthologous repeats and mammalian phylogenetic inference

  • Ali Bashir
  • Chun Ye
  • Alkes L. Price
  • Vineet Bafna
  • First Published July 5, 2005
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