Method
Multicondition and multimodal temporal profile inference during mouse embryonic development
- First Published August 14, 2025
Method
Systematic identification of interchromosomal interaction networks supports the existence of specialized RNA factories
- First Published September 25, 2024
Method
fibertools" > DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools
- First Published June 7, 2024
Method
Using long-read CAGE sequencing to profile cryptic-promoter-derived transcripts and their contribution to the immunopeptidome
- First Published December 8, 2023
Method
Transcript assembly improves expression quantification of transposable elements in single-cell RNA-seq data
- First Published December 21, 2020
Method
Epigenomic differences in the human and chimpanzee genomes are associated with structural variation
- First Published December 10, 2020
Method
Guide Positioning Sequencing identifies aberrant DNA methylation patterns that alter cell identity and tumor-immune surveillance networks
- First Published January 22, 2019
Method
HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient
- First Published August 30, 2017
Method
Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expression
- First Published February 12, 2015