Method
Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm
- First Published March 4, 2025
Method
k-mer analysis" > Seamless, rapid, and accurate analyses of outbreak genomic data using split k-mer analysis
- First Published October 15, 2024
Method
Pangenome-spanning epistasis and coselection analysis via de Bruijn graphs
- First Published August 12, 2024
Method
Accurate and fast graph-based pangenome annotation and clustering with ggCaller
- First Published August 24, 2023
Method
Genealogical inference and more flexible sequence clustering using iterative-PopPUNK
- First Published May 30, 2023
Method
Fast and flexible bacterial genomic epidemiology with PopPUNK
- First Published January 24, 2019
Method
Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I–induced DNA damage
- First Published December 20, 2010