Method
Unified integration of spatial transcriptomics across platforms with LLOKI
- First Published November 13, 2025
Method
Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data
- First Published May 24, 2022
Method
TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes
- First Published December 18, 2020
Method
MOCHI enables discovery of heterogeneous interactome modules in 3D nucleome
- First Published January 6, 2020
Method
Predicting cell-type–specific gene expression from regions of open chromatin
- First Published September 5, 2012
Method
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
- First Published November 24, 2010