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Method

Accurate estimation of intraspecific microbial gene content variation in metagenomic data with MIDAS v3 and StrainPGC

Byron J. Smith
Chunyu Zhao
Veronika Dubinkina
Xiaofan Jin
Liron Zahavi
Saar Shoer
Jacqueline Moltzau-Anderson
Eran Segal
Katherine S. Pollard

First Published April 10, 2025

Method

Unraveling determinants of transcription factor binding outside the core binding site

Michal Levo
Einat Zalckvar
Eilon Sharon
Ana Carolina Dantas Machado
Yael Kalma
Maya Lotam-Pompan
... [+1 authors] ...,
Adina Weinberger
Zohar Yakhini
Remo Rohs
Eran Segal

First Published March 11, 2015

Method

DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly

Ilari Scheinin
Daoud Sie
Henrik Bengtsson
Mark A. van de Wiel
Adam B. Olshen
Hinke F. van Thuijl Hendrik F. van Essen Paul P. Eijk François Rustenburg Gerrit A. Meijer Jaap C. Reijneveld
... [+6 authors] ...,
Pieter Wesseling
Daniel Pinkel
Donna G. Albertson
Bauke Ylstra

First Published September 18, 2014

Method

Probing the effect of promoters on noise in gene expression using thousands of designed sequences

Eilon Sharon
David van Dijk
Yael Kalma
Leeat Keren
Ohad Manor
Zohar Yakhini
Eran Segal

First Published July 16, 2014