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Your search for returned 7 results

Method

Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data

Kaixuan Luo
Jianling Zhong
Alexias Safi
Linda K. Hong
Alok K. Tewari
Lingyun Song
... [+1 authors] ...,
Timothy E. Reddy
Li Ma
Gregory E. Crawford
Alexander J. Hartemink

First Published May 24, 2022

Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

Dongwon Lee
Ashish Kapoor
Alexias Safi
Lingyun Song
Marc K. Halushka
Gregory E. Crawford
Aravinda Chakravarti

First Published August 23, 2018

Method

Mapping nucleosome positions using DNase-seq

Jianling Zhong
Kaixuan Luo
Peter S. Winter
Gregory E. Crawford
Edwin S. Iversen
Alexander J. Hartemink

First Published January 15, 2016

Method

Predicting cell-type–specific gene expression from regions of open chromatin

Anirudh Natarajan
Galip Gürkan Yardımcı
Nathan C. Sheffield
Gregory E. Crawford
Uwe Ohler

First Published September 5, 2012

Method

Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA

Nicholas J. Parkinson
Siarhei Maslau
Ben Ferneyhough
Gang Zhang
Lorna Gregory
David Buck
Jiannis Ragoussis
Chris P. Ponting
Michael D. Fischer

First Published November 16, 2011

Method

High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

Alan P. Boyle
Lingyun Song
Bum-Kyu Lee
Darin London
Damian Keefe
Ewan Birney
Vishwanath R. Iyer
Gregory E. Crawford
Terrence S. Furey

First Published November 24, 2010

Method

Genome assembly quality: Assessment and improvement using the neutral indel model

Stephen Meader
LaDeana W. Hillier
Devin Locke
Chris P. Ponting
Gerton Lunter

First Published March 19, 2010