Method
Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm
- First Published March 4, 2025
Method
k-mer analysis" > Seamless, rapid, and accurate analyses of outbreak genomic data using split k-mer analysis
- First Published October 15, 2024
Method
Pangenome-spanning epistasis and coselection analysis via de Bruijn graphs
- First Published August 12, 2024
Method
Accurate and fast graph-based pangenome annotation and clustering with ggCaller
- First Published August 24, 2023
Method
Partial alignment of multislice spatially resolved transcriptomics data
- First Published August 8, 2023
Method
Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples
- First Published September 4, 2020
Method
Fast and flexible bacterial genomic epidemiology with PopPUNK
- First Published January 24, 2019
Method
Single-cell sequencing data reveal widespread recurrence and loss of mutational hits in the life histories of tumors
- First Published October 13, 2017
