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Method

Simultaneous assessment of human genome and methylome data in a single experiment using limited deamination of methylated cytosine

Bo Yan
Duan Wang
Laurence Ettwiller

First Published June 10, 2024

Method

k using minimum decycling sets" > Efficient minimizer orders for large values of k using minimum decycling sets

David Pellow
Lianrong Pu
Bariş Ekim
Lior Kotlar
Bonnie Berger
Ron Shamir
Yaron Orenstein

First Published August 9, 2023

Method

Efficient mapping of accurate long reads in minimizer space with mapquik

Bariş Ekim
Kristoffer Sahlin
Paul Medvedev
Bonnie Berger
Rayan Chikhi

First Published June 30, 2023

Method

Methyl-SNP-seq reveals dual readouts of methylome and variome at molecule resolution while enabling target enrichment

Bo Yan
Duan Wang
Romualdas Vaisvila
Zhiyi Sun
Laurence Ettwiller

First Published November 4, 2022

Method

Comprehensive determination of transcription start sites derived from all RNA polymerases using ReCappable-seq

Bo Yan
George Tzertzinis
Ira Schildkraut
Laurence Ettwiller

First Published November 23, 2021

Method

Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

Zhiyi Sun
Romualdas Vaisvila
Laura-Madison Hussong
Bo Yan
Chloé Baum
Lana Saleh Mala Samaranayake Shengxi Guan Nan Dai Ivan R. Corrêa
... [+5 authors] ...,
Sriharsa Pradhan
Theodore B. Davis
Thomas C. Evans
Laurence M. Ettwiller

First Published January 19, 2021