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Functional diversity for REST (NRSF) is defined by in vivo binding affinity hierarchies at the DNA sequence level

Alexander W. Bruce
Andrés J. López-Contreras
Paul Flicek
Thomas A. Down
Pawandeep Dhami
Shane C. Dillon Christoph M. Koch
... [+2 authors] ...,
Cordelia F. Langford
Ian Dunham
Robert M. Andrews
David Vetrie

First Published April 28, 2009

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

David S. Johnson
Wei Li
D. Benjamin Gordon
Arindam Bhattacharjee
Bo Curry
Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
... [+39 authors] ...,
Kevin Struhl
Richard M. Myers
Jason D. Lieb
X. Shirley Liu

First Published February 7, 2008

Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions

Laurie Gordon
Shan Yang
Mary Tran-Gyamfi
Dan Baggott
Mari Christensen
Aaron Hamilton Richard Crooijmans
... [+2 authors] ...,
Martien Groenen
Susan Lucas
Ivan Ovcharenko
Lisa Stubbs

First Published October 5, 2007

Identification of clustered YY1 binding sites in imprinting control regions

Jeong Do Kim
Angela K. Hinz
Anne Bergmann
Jennifer M. Huang
Ivan Ovcharenko
Lisa Stubbs
Joomyeong Kim

First Published June 7, 2006

Evolutionary expansion and divergence in the ZNF91 subfamily of primate-specific zinc finger genes

Aaron T. Hamilton
Stuart Huntley
Mary Tran-Gyamfi
Daniel M. Baggott
Laurie Gordon
Lisa Stubbs

First Published April 10, 2006

Evolution and functional classification of vertebrate gene deserts

Ivan Ovcharenko
Gabriela G. Loots
Marcelo A. Nobrega
Ross C. Hardison
Webb Miller
Lisa Stubbs

First Published December 8, 2004

Differential Expansion of Zinc-Finger Transcription Factor Loci in Homologous Human and Mouse Gene Clusters

Mark Shannon
Aaron T. Hamilton
Laurie Gordon
Elbert Branscomb
Lisa Stubbs

First Published May 12, 2003

Leveraging the Mouse Genome for Gene Prediction in Human: From Whole-Genome Shotgun Reads to a Global Synteny Map

Paul Flicek
Evan Keibler
Ping Hu
Ian Korf
Michael R. Brent

First Published January 1, 2003

Discovery of a Novel, Paternally Expressed Ubiquitin-specific Processing Protease Gene through Comparative Analysis of an Imprinted Region of Mouse Chromosome 7 and Human Chromosome 19q13.4

Joomyeong Kim
Vladimir N. Noskov
Xiaochen Lu
Anne Bergmann
Xiaojia Ren
Tiffany Warth
Paul Richardson
Natalya Kouprina
Lisa Stubbs

First Published August 1, 2000

Peg3, Maps to a Zinc Finger Gene-Rich Region of Human Chromosome 19q13.4" > The Human Homolog of a Mouse-Imprinted Gene, Peg3, Maps to a Zinc Finger Gene-Rich Region of Human Chromosome 19q13.4

Joomyeong Kim
Linda Ashworth
Elbert Branscomb
Lisa Stubbs

First Published May 1, 1997