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LETTER

A genomic analysis of RNA polymerase II modification and chromatin architecture related to 3′ end RNA polyadenylation

  • Zheng Lian
  • Alexander Karpikov
  • Jin Lian
  • Milind C. Mahajan
  • Stephen Hartman
  • Mark Gerstein
  • Michael Snyder
  • Sherman M. Weissman
  • First Published May 16, 2008
LETTER

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson
  • Wei Li
  • D. Benjamin Gordon
  • Arindam Bhattacharjee
  • Bo Curry
  • Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
  • ... [+39 authors] ...,
  • Kevin Struhl
  • Richard M. Myers
  • Jason D. Lieb
  • X. Shirley Liu
  • First Published February 7, 2008
LETTER

Plasmodium falciparum" > Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum

  • Tobias Mourier
  • Celine Carret
  • Sue Kyes
  • Zoe Christodoulou
  • Paul P. Gardner
  • Daniel C. Jeffares Robert Pinches Bart Barrell Matt Berriman
  • ... [+4 authors] ...,
  • Sam Griffiths-Jones
  • Alasdair Ivens
  • Chris Newbold
  • Arnab Pain
  • First Published December 20, 2007
LETTER

Toxoplasma gondii" > Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii

  • Asis Khan
  • Ulrike Böhme
  • Krystyna A. Kelly
  • Ellen Adlem
  • Karen Brooks
  • Mark Simmonds Karen Mungall Michael A. Quail Claire Arrowsmith Tracey Chillingworth Carol Churcher David Harris Matthew Collins Nigel Fosker Audrey Fraser Zahra Hance Kay Jagels Sharon Moule Lee Murphy Susan O'Neil Marie-Adele Rajandream David Saunders Kathy Seeger Sally Whitehead Thomas Mayr Xuenan Xuan Junichi Watanabe Yutaka Suzuki Hiroyuki Wakaguri Sumio Sugano Chihiro Sugimoto Ian Paulsen Aaron J. Mackey David S. Roos Neil Hall
  • ... [+30 authors] ...,
  • Matthew Berriman
  • Bart Barrell
  • L. David Sibley
  • James W. Ajioka
  • First Published August 10, 2006
LETTER

Assessing the limits of genomic data integration for predicting protein networks

  • Long J. Lu
  • Yu Xia
  • Alberto Paccanaro
  • Haiyuan Yu
  • Mark Gerstein
  • First Published July 5, 2005
LETTER

Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles

  • Yoav Gilad
  • Scott A. Rifkin
  • Paul Bertone
  • Mark Gerstein
  • Kevin P. White
  • First Published May 2, 2005
LETTER

Millions of Years of Evolution Preserved: A Comprehensive Catalog of the Processed Pseudogenes in the Human Genome

  • Zhaolei Zhang
  • Paul M. Harrison
  • Yin Liu
  • Mark Gerstein
  • First Published December 1, 2003
LETTER

Systematic Learning of Gene Functional Classes From DNA Array Expression Data by Using Multilayer Perceptrons

  • Alvaro Mateos
  • Joaquı́n Dopazo
  • Ronald Jansen
  • Yuhai Tu
  • Mark Gerstein
  • Gustavo Stolovitzky
  • First Published November 1, 2002
LETTER

Molecular Fossils in the Human Genome: Identification and Analysis of the Pseudogenes in Chromosomes 21 and 22

  • Paul M. Harrison
  • Hedi Hegyi
  • Suganthi Balasubramanian
  • Nicholas M. Luscombe
  • Paul Bertone
  • Nathaniel Echols
  • Ted Johnson
  • Mark Gerstein
  • First Published February 1, 2002
LETTER

Relating Whole-Genome Expression Data with Protein-Protein Interactions

  • Ronald Jansen
  • Dov Greenbaum
  • Mark Gerstein
  • First Published January 1, 2002
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