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ARTICLE

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • Elliott H. Margulies
  • Gregory M. Cooper
  • George Asimenos
  • Daryl J. Thomas
  • Colin N. Dewey
  • Adam Siepel Ewan Birney Damian Keefe Ariel S. Schwartz Minmei Hou James Taylor Sergey Nikolaev Juan I. Montoya-Burgos Ari Löytynoja Simon Whelan Fabio Pardi Tim Massingham James B. Brown Peter Bickel Ian Holmes James C. Mullikin Abel Ureta-Vidal Benedict Paten Eric A. Stone Kate R. Rosenbloom W. James Kent Gerard G. Bouffard Xiaobin Guan Nancy F. Hansen Jacquelyn R. Idol Valerie V.B. Maduro Baishali Maskeri Jennifer C. McDowell Morgan Park Pamela J. Thomas Alice C. Young Robert W. Blakesley Donna M. Muzny Erica Sodergren David A. Wheeler Kim C. Worley Huaiyang Jiang George M. Weinstock Richard A. Gibbs Tina Graves Robert Fulton Elaine R. Mardis Richard K. Wilson Michele Clamp James Cuff Sante Gnerre David B. Jaffe Jean L. Chang Kerstin Lindblad-Toh Eric S. Lander Angie Hinrichs Heather Trumbower Hiram Clawson Ann Zweig Robert M. Kuhn Galt Barber Rachel Harte Donna Karolchik Matthew A. Field Richard A. Moore Carrie A. Matthewson Jacqueline E. Schein Marco A. Marra Stylianos E. Antonarakis Serafim Batzoglou Nick Goldman Ross Hardison David Haussler
  • ... [+68 authors] ...,
  • Webb Miller
  • Lior Pachter
  • Eric D. Green
  • Arend Sidow
  • First Published June 13, 2007
ARTICLE

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

  • Adam Siepel
  • Gill Bejerano
  • Jakob S. Pedersen
  • Angie S. Hinrichs
  • Minmei Hou
  • Kate Rosenbloom Hiram Clawson John Spieth LaDeana W. Hillier Stephen Richards George M. Weinstock Richard K. Wilson
  • ... [+7 authors] ...,
  • Richard A. Gibbs
  • W. James Kent
  • Webb Miller
  • David Haussler
  • First Published July 15, 2005
ARTICLE

Patterns of Insertions and Their Covariation With Substitutions in the Rat, Mouse, and Human Genomes

  • Shan Yang
  • Arian F. Smit
  • Scott Schwartz
  • Francesca Chiaromonte
  • Krishna M. Roskin
  • David Haussler
  • Webb Miller
  • Ross C. Hardison
  • First Published April 1, 2004
ARTICLE

Hox Clusters and Genome Evolution in Ray-Fin Fish" > Developmental Roles of Pufferfish Hox Clusters and Genome Evolution in Ray-Fin Fish

  • Angel Amores
  • Tohru Suzuki
  • Yi-Lin Yan
  • Jordan Pomeroy
  • Amy Singer
  • Chris Amemiya
  • John H. Postlethwait
  • First Published January 5, 2004
ARTICLE

Covariation in Frequencies of Substitution, Deletion, Transposition, and Recombination During Eutherian Evolution

  • Ross C. Hardison
  • Krishna M. Roskin
  • Shan Yang
  • Mark Diekhans
  • W. James Kent
  • Ryan Weber Laura Elnitski Jia Li Michael O'Connor Diana Kolbe Scott Schwartz Terrence S. Furey Simon Whelan Nick Goldman
  • ... [+9 authors] ...,
  • Arian Smit
  • Webb Miller
  • Francesca Chiaromonte
  • David Haussler
  • First Published January 1, 2003
ARTICLE

Zebrafish Comparative Genomics and the Origins of Vertebrate Chromosomes

  • John H. Postlethwait
  • Ian G. Woods
  • Phuong Ngo-Hazelett
  • Yi-Lin Yan
  • Peter D. Kelly
  • Felicia Chu
  • Hui Huang
  • Alicia Hill-Force
  • William S. Talbot
  • First Published December 1, 2000
ARTICLE

Sequence and Comparative Analysis of the Mouse 1-Megabase Region Orthologous to the Human 11p15 Imprinted Domain

  • Patrick Onyango
  • Webb Miller
  • Jessica Lehoczky
  • Cheuk T. Leung
  • Bruce Birren
  • Sarah Wheelan
  • Ken Dewar
  • Andrew P. Feinberg
  • First Published November 1, 2000
ARTICLE

gdf7 and Comparative Genetic Mapping of Genes Belonging to the Growth/Differentiation Factor 5, 6, 7 Subgroup of the TGF-β Superfamily" > Isolation of Zebrafish gdf7 and Comparative Genetic Mapping of Genes Belonging to the Growth/Differentiation Factor 5, 6, 7 Subgroup of the TGF-β Superfamily

  • Alan J. Davidson
  • John H. Postlethwait
  • Yi-Lin Yan
  • David R. Beier
  • Cherie van Doren
  • Dorothee Foernzler
  • Anthony J. Celeste
  • Kathryn E. Crosier
  • Philip S. Crosier
  • First Published February 1, 1999
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