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ARTICLE

The DART classification of unannotated transcription within the ENCODE regions: Associating transcription with known and novel loci

  • Joel S. Rozowsky
  • Daniel Newburger
  • Fred Sayward
  • Jiaqian Wu
  • Greg Jordan
  • Jan O. Korbel Ugrappa Nagalakshmi Jin Yang Deyou Zheng Roderic Guigó Thomas R. Gingeras
  • ... [+6 authors] ...,
  • Sherman Weissman
  • Perry Miller
  • Michael Snyder
  • Mark B. Gerstein
  • First Published June 13, 2007
ARTICLE

Integrated analysis of experimental data sets reveals many novel promoters in 1% of the human genome

  • Nathan D. Trinklein
  • Ulaş Karaöz
  • Jiaqian Wu
  • Anason Halees
  • Shelley Force Aldred
  • Patrick J. Collins Deyou Zheng Zhengdong D. Zhang
  • ... [+3 authors] ...,
  • Mark B. Gerstein
  • Michael Snyder
  • Richard M. Myers
  • Zhiping Weng
  • First Published June 13, 2007
ARTICLE

Drosophila retinal determination protein Eyeless" > Genome-wide identification of direct targets of the Drosophila retinal determination protein Eyeless

  • Edwin J. Ostrin
  • Yumei Li
  • Kristi Hoffman
  • Jing Liu
  • Keqing Wang
  • Li Zhang
  • Graeme Mardon
  • Rui Chen
  • First Published March 13, 2006
ARTICLE

Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution" > Comparative genome sequencing of Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution

  • Stephen Richards
  • Yue Liu
  • Brian R. Bettencourt
  • Pavel Hradecky
  • Stan Letovsky
  • Rasmus Nielsen Kevin Thornton Melissa J. Hubisz Rui Chen Richard P. Meisel Olivier Couronne Sujun Hua Mark A. Smith Peili Zhang Jing Liu Harmen J. Bussemaker Marinus F. van Batenburg Sally L. Howells Steven E. Scherer Erica Sodergren Beverly B. Matthews Madeline A. Crosby Andrew J. Schroeder Daniel Ortiz-Barrientos Catharine M. Rives Michael L. Metzker Donna M. Muzny Graham Scott David Steffen David A. Wheeler Kim C. Worley Paul Havlak K. James Durbin Amy Egan Rachel Gill Jennifer Hume Margaret B. Morgan George Miner Cerissa Hamilton Yanmei Huang Lenée Waldron Daniel Verduzco Kerstin P. Clerc-Blankenburg Inna Dubchak Mohamed A.F. Noor Wyatt Anderson Kevin P. White Andrew G. Clark
  • ... [+43 authors] ...,
  • Stephen W. Schaeffer
  • William Gelbart
  • George M. Weinstock
  • Richard A. Gibbs
  • First Published January 3, 2005
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