Searching journal content for articles similar to Zhou et al. 34 (11): 1931.

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  1. Method: Efficient and accurate KIR and HLA genotyping with massively parallel sequencing data
    • Li Song,
    • Gali Bai,
    • X. Shirley Liu,
    • Bo Li,
    • and Heng Li
    Genome Res. May 11, 2023 gr.277585.122; Published in Advance May 11, 2023, doi:10.1101/gr.277585.122
    ...investigated the HLA genotyping by evaluating with 1kGP annotations which were experimentally validated extensively in the original study. As KIR genes have their own unique features, experimental validation might still be needed for KIR genotyping, but this is beyond the scope of the current study. While HLA...
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  2. Mini-Review: A Hitchhiker's Guide to long-read genomic analysis
    • Medhat Mahmoud,
    • Daniel P. Agustinho,
    • and Fritz J. Sedlazeck
    Genome Res. April 2025 35: 545-558; doi:10.1101/gr.279975.124
    ...using long-read mapping-based methods.Finally, while variant calling can utilize existing reference annotations (e.g., from T2T-CHM13v2 or GRCh), direct functional annotation of a assembly can provide additional insights about genes or other functional elements. This is particularly valuable when...
  3. Research: Targeted and complete genomic sequencing of the major histocompatibility complex in haplotypic form of individual heterozygous samples
    • Taishan Hu,
    • Timothy L. Mosbruger,
    • Nikolaos G. Tairis,
    • Amalia Dinou,
    • Pushkala Jayaraman,
    • Mahdi Sarmady,
    • Kingham Brewster,
    • Yang Li,
    • Tristan J. Hayeck,
    • Jamie L. Duke,
    • and Dimitri S. Monos
    Genome Res. October 2024 34: 1500-1513; Published in Advance September 26, 2024, doi:10.1101/gr.278588.123
    ..., is a crucial genomic region encompassing over 260 genes, with about half playing critical roles in innate and adaptive immunity (Horton et al. 2004). Importantly, the MHC includes the human leukocyte antigen (HLA) genes critical for transplantation. The MHC also holds the highest density of disease...
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  4. Editorial: Revolutionizing genomics and medicine—one long molecule at a time
    • Ana Conesa,
    • Alexander Hoischen,
    • and Fritz J. Sedlazeck
    Genome Res. November 2024 34: ix-xi; doi:10.1101/gr.280179.124
    .... 2024 . Full-resolution HLA and KIR gene annotations for human assemblies . Genome Res (this issue) 34 : 1931 – 1941 . doi: 10.1101/gr.278985.124 Genome Res GENOME Genome Research Genome Res. Genome Res 1088-9051 1549-5469 Cold Spring Harbor Laboratory Press 9509184 10.1101/gr.280179.124 ;34/11/ix ;gr...
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