Searching journal content for articles similar to Zhang et al. 17 (5): 612.

Displaying results 1-10 of 10
For checked items
  1. Research: Conserved microRNA targeting reveals preexisting gene dosage sensitivities that shaped amniote sex chromosome evolution
    • Sahin Naqvi,
    • Daniel W. Bellott,
    • Kathy S. Lin,
    • and David C. Page
    Genome Res. April 2018 28: 474-483; Published in Advance February 15, 2018, doi:10.1101/gr.230433.117
    ...Chromosome inactivation (XCI) in females, but some Y-linked genes were retained during the course of sex chromosome evolution, and many X-linked genes did not become subject to XCI. We reconstructed gene-by-gene dosage sensitivities on the ancestral autosomes through phylogenetic analysis of microRNA (mi...
    OPEN ACCESS ARTICLE
  2. Research: Birth and expression evolution of mammalian microRNA genes
    • Julien Meunier,
    • Frédéric Lemoine,
    • Magali Soumillon,
    • Angélica Liechti,
    • Manuela Weier,
    • Katerina Guschanski,
    • Haiyang Hu,
    • Philipp Khaitovich,
    • and Henrik Kaessmann
    Genome Res. January 2013 23: 34-45; Published in Advance October 3, 2012, doi:10.1101/gr.140269.112
    ...Birth and expression evolution of mammalian microRNA genes Julien Meunier 1 , 2 , 7 , Frédéric Lemoine 1 , 4 , Magali Soumillon 1 , 2 , 5 , 6 , Angélica Liechti 1 , Manuela Weier 1 , Katerina Guschanski 1 , 2...
    OPEN ACCESS ARTICLE
  3. Review: Origins, evolution, and phenotypic impact of new genes
    • Henrik Kaessmann
    Genome Res. October 2010 20: 1313-1326; Published in Advance July 22, 2010, doi:10.1101/gr.101386.109
    ...considered to be a major contributor to adaptive evolutionary innovation. Here, I review the origin and evolution of new genes and their functions in eukaryotes, an area of research that has made rapid progress in the past decade thanks to the genomics revolution. Indeed, recent work has provided initial...
  4. Platypus Special/Letter: Conservation of small RNA pathways in platypus
    • Elizabeth P. Murchison,
    • Pouya Kheradpour,
    • Ravi Sachidanandam,
    • Carly Smith,
    • Emily Hodges,
    • Zhenyu Xuan,
    • Manolis Kellis,
    • Frank Grützner,
    • Alexander Stark,
    • and Gregory J. Hannon
    Genome Res. June 2008 18: 995-1004; Published in Advance May 7, 2008, doi:10.1101/gr.073056.107
    ...conserved microRNA species display their signature tissue-specific expression patterns. In addition, we find a large rapidly evolving cluster of microRNAs on platypus chromosome X1, which is unique to monotremes. Platypus and echidna testes contain a robust Piwi-interacting (piRNA) system, which appears...
  5. Research: Human-specific features of spatial gene expression and regulation in eight brain regions
    • Chuan Xu,
    • Qian Li,
    • Olga Efimova,
    • Liu He,
    • Shoji Tatsumoto,
    • Vita Stepanova,
    • Takao Oishi,
    • Toshifumi Udono,
    • Katsushi Yamaguchi,
    • Shuji Shigenobu,
    • Akiyoshi Kakita,
    • Hiroyuki Nawa,
    • Philipp Khaitovich,
    • and Yasuhiro Go
    Genome Res. August 2018 28: 1097-1110; Published in Advance June 13, 2018, doi:10.1101/gr.231357.117
    ....Changes in gene expression were long thought to underlie the rapid evolution of phenotypic traits, including the evolution of human cognition. To date, a number of studies have investigated this topic and have reported scores of genes showing expression unique to the human brain in comparison to closely related...
    OPEN ACCESS ARTICLE
  6. RESOURCE: Initial sequence and comparative analysis of the cat genome
    • Joan U. Pontius,
    • James C. Mullikin,
    • Douglas R. Smith,
    • Agencourt Sequencing Team,
    • Kerstin Lindblad-Toh,
    • Sante Gnerre,
    • Michele Clamp,
    • Jean Chang,
    • Robert Stephens,
    • Beena Neelam,
    • Natalia Volfovsky,
    • Alejandro A. Schäffer,
    • Richa Agarwala,
    • Kristina Narfström,
    • William J. Murphy,
    • Urs Giger,
    • Alfred L. Roca,
    • Agostinho Antunes,
    • Marilyn Menotti-Raymond,
    • Naoya Yuhki,
    • Jill Pecon-Slattery,
    • Warren E. Johnson,
    • Guillaume Bourque,
    • Glenn Tesler,
    • NISC Comparative Sequencing Program,
    • and Stephen J. O’Brien
    Genome Res. November 2007 17: 1675-1689; doi:10.1101/gr.6380007
    ...mitochondrial ( numt ) sequences, micro-RNAs, and evolutionary breakpoints that suggest historic balancing of translocation and inversion incidences in distinct mammalian lineages. Large numbers of single nucleotide polymorphisms (SNPs), deletion insertion polymorphisms (DIPs), and short tandem repeats (STRs...
  7. ARTICLE: Ancient duplicated conserved noncoding elements in vertebrates: A genomic and functional analysis
    • Gayle K. McEwen,
    • Adam Woolfe,
    • Debbie Goode,
    • Tanya Vavouri,
    • Heather Callaway,
    • and Greg Elgar
    Genome Res. April 2006 16: 451-465; Published in Advance March 13, 2006, doi:10.1101/gr.4143406
    ...-scale duplication events thought to have occurred at the origin of vertebrates. We propose a model whereby gene duplication and the evolution of cis -regulatory elements can be considered in the context of increased morphological diversity and the emergence of the modern vertebrate body plan. Footnotes...
  8. 12 Drosophila Genomes/Letter: Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes
    • Alexander Stark,
    • Pouya Kheradpour,
    • Leopold Parts,
    • Julius Brennecke,
    • Emily Hodges,
    • Gregory J. Hannon,
    • and Manolis Kellis
    Genome Res. December 2007 17: 1865-1879; Published in Advance November 7, 2007, doi:10.1101/gr.6593807
    ...Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes Alexander Stark 1 , 2 , 4 , 6 , Pouya Kheradpour 2 , 4 , Leopold Parts 2 , 5 , Julius Brennecke 3 , Emily Hodges 3 , Gregory J. Hannon 3...
    OPEN ACCESS ARTICLE
  9. PERSPECTIVE: Raising the estimate of functional human sequences
    • Michael Pheasant and
    • John S. Mattick
    Genome Res. September 2007 17: 1245-1253; Published in Advance August 9, 2007, doi:10.1101/gr.6406307
    .../or have acquired lineage-specific functions. Indeed, many regulatory sequences and known functional noncoding RNAs, including many microRNAs, are not conserved over significant evolutionary distances, and recent evidence from the ENCODE project suggests that many functional elements show no detectable...
  10. REVIEW: Mammalian non-LTR retrotransposons: For better or worse, in sickness and in health
    • Victoria P. Belancio,
    • Dale J. Hedges,
    • and Prescott Deininger
    Genome Res. March 2008 18: 343-358; Published in Advance February 6, 2008, doi:10.1101/gr.5558208
    ...clear that SINEs are frequently exapted by host s for use in important functional roles. A recent analysis indicates that as much as 20% of known human endogenous microRNAs are driven by Alu Pol III promoters ( Borchert et al. 2006 ). There are also accumulating examples of evolutionary conservation...
    OPEN ACCESS ARTICLE
For checked items

Search Results

New Search

Modify Results

Citation format:
Results / page:
Results order:

This search

  • Alert me when new articles matching this search are published
  • Download all citations on this page to my citation manager

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research