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LETTER: A Genomic Analysis of Rat Proteases and Protease Inhibitors
- Xose S. Puente and
- Carlos López-Otín
Genome Res. April 2004 14: 609-622; doi:10.1101/gr.1946304
...-specific, are shown in green. Branches corresponding to rat-specific members are shown in white; those mouse-specific, in red. Cathepsin L–like proteases, the only group containing one extra member in human, are shown in blue. Analysis of the C02 family of cysteine proteinases—the calpains—has also revealed...
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Letter: The origins of apicomplexan sequence innovation
- James Wasmuth,
- Jennifer Daub,
- José Manuel Peregrín-Alvarez,
- Constance A.M. Finney,
- and John Parkinson
Genome Res. July 2009 19: 1202-1213; Published in Advance April 10, 2009, doi:10.1101/gr.083386.108
...profiles that reveal the extent of apicomplexan sequence diversity. Sequences without a significant match outside the phylum were denoted as apicomplexan specialized. These were collated into 9134 discrete protein families and placed in the context of the apicomplexan phylogeny, identifying the putative...

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