Searching journal content for articles similar to Wu and Li 20 (4): 473.

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  1. Research: Unusual combinatorial involvement of poly-A/T tracts in organizing genes and chromatin in Dictyostelium
    • Gue Su Chang,
    • Angelika A. Noegel,
    • Travis N. Mavrich,
    • Rolf Müller,
    • Lynn Tomsho,
    • Elissa Ward,
    • Marius Felder,
    • Cizhong Jiang,
    • Ludwig Eichinger,
    • Gernot Glöckner,
    • Stephan C. Schuster,
    • and B. Franklin Pugh
    Genome Res. June 2012 22: 1098-1106; Published in Advance March 20, 2012, doi:10.1101/gr.131649.111
    ...at their 5′ ends by poly-T tracts and precisely at their 3′ ends by poly-A tracts. These tracts are also associated with nucleosome-free regions and are embedded with precisely positioned TATA boxes. Homo- and heteropolymeric tracts of A and T demarcate nucleosome border regions. Together, these findings...
  2. Research: Core promoter sequence in yeast is a major determinant of expression level
    • Shai Lubliner,
    • Ifat Regev,
    • Maya Lotan-Pompan,
    • Sarit Edelheit,
    • Adina Weinberger,
    • and Eran Segal
    Genome Res. July 2015 25: 1008-1017; Published in Advance May 12, 2015, doi:10.1101/gr.188193.114
    ...in highly active core promoters is focused within a narrow region, that poly(dA:dT) orientation has a functional consequence at the 3′ end of promoters, and that orthologous core promoters across yeast species have conserved activities. Our results demonstrate the importance of core promoters...
  3. Resource: Pervasive and dynamic transcription initiation in Saccharomyces cerevisiae
    • Zhaolian Lu and
    • Zhenguo Lin
    Genome Res. July 2019 29: 1198-1210; Published in Advance May 10, 2019, doi:10.1101/gr.245456.118
    ...the nucleosome occupancy data obtained from Field et al. (2009). We observed a nucleosome-free region (NRF) immediately upstream of TSS in constitutive core promoters (Fig. 4D; Supplemental Fig. S9). In contrast, the inducible core promoters generally are occupied with nucleosomes in the same region. Most...
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