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Resource: A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection
- Mats E. Pettersson,
- Christina M. Rochus,
- Fan Han,
- Junfeng Chen,
- Jason Hill,
- Ola Wallerman,
- Guangyi Fan,
- Xiaoning Hong,
- Qiwu Xu,
- He Zhang,
- Shanshan Liu,
- Xin Liu,
- Leanne Haggerty,
- Toby Hunt,
- Fergal J. Martin,
- Paul Flicek,
- Ignas Bunikis,
- Arild Folkvord,
- and Leif Andersson
Genome Res. November 2019 29: 1919-1928; Published in Advance October 24, 2019, doi:10.1101/gr.253435.119
....54 ↵Bradley KM, Breyer JP, Melville DB, Broman KW, Knapik EW, Smith JR. 2011. An SNP-based linkage map for zebrafish reveals sex determination loci. G3 (Bethesda) 1: 3–9. doi:10.1534/g3.111.000190 ↵Browning SR, Browning BL. 2007. Rapid and accurate haplotype phasing and missing-data inference for whole...
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PERSPECTIVE: Fish genomics and biology
- Hugues Roest Crollius and
- Jean Weissenbach
Genome Res. December 2005 15: 1675-1682; doi:10.1101/gr.3735805
...could be complicated by an additional duplication in the salmonid lineage some 25–100 Mya ( Allendorf and Thorgaard 1984 ). The sarcopterygian fish coelacanth is the nearest living relative of tetrapods ( Gorr et al. 1991 ) ( Fig. 1 ) and thus escaped the whole- duplication that affected the teleosts...
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Research: The house fly Y Chromosome is young and minimally differentiated from its ancient X Chromosome partner
- Richard P. Meisel,
- Christopher A. Gonzales,
- and Hoang Luu
Genome Res. August 2017 27: 1417-1426; Published in Advance June 15, 2017, doi:10.1101/gr.215509.116
...that is gene poor. In contrast to highly differentiated sex chromosomes, nascent sex chromosome pairs are homomorphic or very similar in sequence content. Nascent sex chromosomes can arise if an existing sex chromosome fuses to an autosome or an autosome acquires a new sex-determining locus/allele. Sex...
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ARTICLE: Zebrafish Comparative Genomics and the Origins of Vertebrate Chromosomes
- John H. Postlethwait,
- Ian G. Woods,
- Phuong Ngo-Hazelett,
- Yi-Lin Yan,
- Peter D. Kelly,
- Felicia Chu,
- Hui Huang,
- Alicia Hill-Force,
- and William S. Talbot
Genome Res. December 1, 2000 10: 1890-1902; doi:10.1101/gr.164800
...radiation, as the current scanty evidence suggests, or even earlier in the ray-fin lineage, or later in several teleost lineages independently? (Genome duplications in salmonids and carp have almost surely occurred after, and on top of, the -wide duplication detected in zebrafish [ Allendorf and Thorgaard...
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ARTICLE: Genetic mapping in Xiphophorus hybrid fish: assignment of 43 AP-PCR/RAPD and isozyme markers to multipoint linkage groups.
- S Kazianis,
- D C Morizot,
- B B McEntire,
- R S Nairn,
- and R L Borowsky
Genome Res. April 1996 6: 280-289; doi:10.1101/gr.6.4.280
...of fishes of the genus Xiphophorus (Teleostei: Poeciliidae). Genetics 127 : 399 – 410 . Morizot, D., J. Harless, R. Nairn, K. Kallman, and R. Walter. 1993. Linkage maps of non-salmonid fishes. In Genetic maps: Locus maps of complex s , 6th ed. (ed. S.J. O'Brien), pp. 318–325. Cold Spring Harbor Laboratory...

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