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RESOURCE: ProtoBee: Hierarchical classification and annotation of the honey bee proteome
- Noam Kaplan and
- Michal Linial
Genome Res. November 2006 16: 1431-1438; Published in Advance October 25, 2006, doi:10.1101/gr.4916306
....G. , Liu, L. , Pardinas, J.R. , Robertson, H.M. , Soares, M.B. , Robinson, G.E. ( 2002 ) Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee . Genome Res. 2 : 555 – 566 . ProtoBee: Hierarchical classification and annotation of the honey bee proteome...
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LETTER: Genomic Analysis in the sting-2 Quantitative Trait Locus for Defensive Behavior in the Honey Bee, Apis mellifera
- Neil F. Lobo,
- Lucas Q. Ton,
- Catherine A. Hill,
- Christine Emore,
- Jeanne Romero-Severson,
- Greg J. Hunt,
- and Frank H. Collins
Genome Res. December 2003 13: 2588-2593; doi:10.1101/gr.1634503
....R., Bonaldo, M.F., Kumar, C.G., Liu, L., Pardinas, J.R., Robertson, H.M., Soares, M.B., and Robinson, G.E. 2002 . Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee. Genome Res. 12 : 555 -566. Genomic Analysis in the sting-2 Quantitative Trait Locus...
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LETTER: Evolution of the Yellow/Major Royal Jelly Protein family and the emergence of social behavior in honey bees
- Mark David Drapeau,
- Stefan Albert,
- Robert Kucharski,
- Carsten Prusko,
- and Ryszard Maleszka
Genome Res. November 2006 16: 1385-1394; Published in Advance October 25, 2006, doi:10.1101/gr.5012006
....) Apidologie (Celle) 25 : 596 – 600 . ↵ Klaudiny, J. , Hanes, J. , Kulifajova, J. , Albert, S. , Simuth, J. ( 1994b ) Molecular cloning of two cDNAs from the head of the nurse honey bee ( Apis mellifera L.) for coding related proteins of royal jelly . J. Apic. Res. 33 : 105 – 111 . ↵ Kopp, A. , Duncan, I...
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RESOURCE: A global assembly of cotton ESTs
- Joshua A. Udall,
- Jordan M. Swanson,
- Karl Haller,
- Ryan A. Rapp,
- Michael E. Sparks,
- Jamie Hatfield,
- Yeisoo Yu,
- Yingru Wu,
- Caitriona Dowd,
- Aladdin B. Arpat,
- Brad A. Sickler,
- Thea A. Wilkins,
- Jin Ying Guo,
- Xiao Ya Chen,
- Jodi Scheffler,
- Earl Taliercio,
- Ricky Turley,
- Helen McFadden,
- Paxton Payton,
- Natalya Klueva,
- Randell Allen,
- Deshui Zhang,
- Candace Haigler,
- Curtis Wilkerson,
- Jinfeng Suo,
- Stefan R. Schulze,
- Margaret L. Pierce,
- Margaret Essenberg,
- HyeRan Kim,
- Danny J. Llewellyn,
- Elizabeth S. Dennis,
- David Kudrna,
- Rod Wing,
- Andrew H. Paterson,
- Cari Soderlund,
- and Jonathan F. Wendel
Genome Res. March 2006 16: 441-450; Published in Advance February 14, 2006, doi:10.1101/gr.4602906
...into gene expression in numerous different tissues and environmental conditions, and sets the stage for the development of a cotton oligonucleotide microarray with deep genomic coverage. Results EST assembly A total of 185,198 EST sequences from 30 cDNA libraries were collected from 14 different research...
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RESOURCE: High-Throughput Gene Discovery in the Rat
- Todd E. Scheetz,
- Jennifer J. Laffin,
- Brian Berger,
- Sara Holte,
- Susan A. Baumes,
- Robert Brown II,
- Shereen Chang,
- Justin Coco,
- Jim Conklin,
- Keith Crouch,
- Micca Donohue,
- Greg Doonan,
- Chris Estes,
- Mari Eyestone,
- Katrina Fishler,
- Jack Gardiner,
- Lankai Guo,
- Brad Johnson,
- Catherine Keppel,
- Rikki Kreger,
- Mark Lebeck,
- Rudy Marcelino,
- Vladan Miljkovich,
- Mindee Perdue,
- Ling Qui,
- Joshua Rehmann,
- Rebecca S. Reiter,
- Bridgette Rhoads,
- Kelly Schaefer,
- Christina Smith,
- Ivana Sunjevaric,
- Kurtis Trout,
- Ning Wu,
- Clayton L. Birkett,
- Jared Bischof,
- Barry Gackle,
- Allen Gavin,
- A. Jason Grundstad,
- Brian Mokrzycki,
- Chris Moressi,
- Brian O'Leary,
- Kevin Pedretti,
- Chad Roberts,
- Natalie L. Robinson,
- Michael Smith,
- Dylan Tack,
- Nishank Trivedi,
- Tamara Kucaba,
- Tom Freeman,
- Jim J.-C. Lin,
- Maria F. Bonaldo,
- Thomas L. Casavant,
- Val C. Sheffield,
- and M. Bento Soares
Genome Res. April 2004 14: 733-741; doi:10.1101/gr.1414204
...-immune disorders ( Jacob et al. 1992 ). To make efficient use of the rat as a model for human disease and physiology, a first step is to identify a comprehensive set of genes. This process of gene identification is dubbed gene discovery. Large-scale production of expressed sequence tags (ESTs) from arrayed cDNA...
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RESOURCE: Analysis and Functional Annotation of an Expressed Sequence Tag Collection for Tropical Crop Sugarcane
- André L. Vettore,
- Felipe R. da Silva,
- Edson L. Kemper,
- Glaucia M. Souza,
- Aline M. da Silva,
- Maria Inês T. Ferro,
- Flavio Henrique-Silva,
- Éder A. Giglioti,
- Manoel V.F. Lemos,
- Luiz L. Coutinho,
- Marina P. Nobrega,
- Helaine Carrer,
- Suzelei C. França,
- Maurício Bacci, Jr.,
- Maria Helena S. Goldman,
- Suely L. Gomes,
- Luiz R. Nunes,
- Luis E.A. Camargo,
- Walter J. Siqueira,
- Marie-Anne Van Sluys,
- Otavio H. Thiemann,
- Eiko E. Kuramae,
- Roberto V. Santelli,
- Celso L. Marino,
- Maria L.P.N. Targon,
- Jesus A. Ferro,
- Henrique C.S. Silveira,
- Danyelle C. Marini,
- Eliana G.M. Lemos,
- Claudia B. Monteiro-Vitorello,
- José H.M. Tambor,
- Dirce M. Carraro,
- Patrícia G. Roberto,
- Vanderlei G. Martins,
- Gustavo H. Goldman,
- Regina C. de Oliveira,
- Daniela Truffi,
- Carlos A. Colombo,
- Magdalena Rossi,
- Paula G. de Araujo,
- Susana A. Sculaccio,
- Aline Angella,
- Marleide M.A. Lima,
- Vicente E. de Rosa, Jr,
- Fábio Siviero,
- Virginia E. Coscrato,
- Marcos A. Machado,
- Laurent Grivet,
- Sonia M.Z. Di Mauro,
- Francisco G. Nobrega,
- Carlos F.M. Menck,
- Marilia D.V. Braga,
- Guilherme P. Telles,
- Frank A.A. Cara,
- Guilherme Pedrosa,
- João Meidanis,
- and Paulo Arruda
Genome Res. December 2003 13: 2725-2735; Published in Advance January 1, 2003, doi:10.1101/gr.1532103
...of the genome complexity of sugarcane, we undertook a large-scale expressed sequence tag (EST) program. More than 260,000 cDNA clones were partially sequenced from 26 standard cDNA libraries generated from different sugarcane tissues. After the processing of the sequences, 237,954 high-quality ESTs were...
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Review: Advancing genomic technologies and clinical awareness accelerates discovery of disease-associated tandem repeat sequences
- Terence Gall-Duncan,
- Nozomu Sato,
- Ryan K.C. Yuen,
- and Christopher E. Pearson
Genome Res. January 2022 32: 1-27; Published in Advance December 29, 2021, doi:10.1101/gr.269530.120
...cells (Trottier et al. 1995).The continuous discovery of new TR expansion mutations in the 1990s fully leveraged the power of the Human Genome Project, as the huge numbers of sequence-tagged site (STS) markers that became available enabled fine mapping of the disease loci. Today, locus mapping can...

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