Searching journal content for articles similar to Wells et al. 13 (6b): 1360.

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  1. Research: Analysis of canine gene constraint identifies new variants for orofacial clefts and stature
    • Reuben M. Buckley,
    • Nüket Bilgen,
    • Alexander C. Harris,
    • Peter Savolainen,
    • Cafer Tepeli,
    • Metin Erdoğan,
    • Aitor Serres Armero,
    • Dayna L. Dreger,
    • Frank G. van Steenbeek,
    • Marjo K. Hytönen,
    • Heidi G. Parker,
    • Jessica Hale,
    • Hannes Lohi,
    • Bengi Çınar Kul,
    • Adam R. Boyko,
    • and Elaine A. Ostrander
    Genome Res. May 2025 35: 1080-1093; Published in Advance March 24, 2025, doi:10.1101/gr.280092.124
    ...such as stature, pelage, and craniofacial structure are analyzed through genetic association studies. However, such analyses are limited to assayed phenotypes only, leaving difficult-to-measure phenotypic subtleties easily overlooked. We investigated coding variation from over 2000 dogs, leading to discoveries...
    OPEN ACCESS ARTICLE
  2. COMMENTARY: A Guide to the Mammalian Genome
    • Yasushi Okazaki and
    • David A. Hume
    Genome Res. June 2003 13: 1267-1272; doi:10.1101/gr.1445603
    ...and comparative analysis of the mouse . Nature 420 : 520 -562. ↵ Wells, C.A., Ravasi, T., Sultana, R., Yagi, K., Carninci, P., Bono, H., Faulkner, G., Okazaki, Y., Quackenbush, J., Hume, D.A., et al. 2003 . Continued discovery of transcriptional units expressed in cells of the mouse mononuclear phagocyte lineage...
  3. ARTICLE: Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome
    • Timothy Ravasi,
    • Harukazu Suzuki,
    • Ken C. Pang,
    • Shintaro Katayama,
    • Masaaki Furuno,
    • Rie Okunishi,
    • Shiro Fukuda,
    • Kelin Ru,
    • Martin C. Frith,
    • M. Milena Gongora,
    • Sean M. Grimmond,
    • David A. Hume,
    • Yoshihide Hayashizaki,
    • and John S. Mattick
    Genome Res. January 2006 16: 11-19; Published in Advance December 12, 2005, doi:10.1101/gr.4200206
    ...contained only singletons. Full-length sequencing and analysis by the FANTOM2 consortium of >60,000 putative full-length transcripts revealed that these were derived from ∼33,400 distinct loci (transcription units with one or more promoters and polyadenylation sites), of which 47% (almost 16,000) lack...
  4. Article: Meiotic recombination generates rich diversity in NK cell receptor genes, alleles, and haplotypes
    • Paul J. Norman,
    • Laurent Abi-Rached,
    • Ketevan Gendzekhadze,
    • John A. Hammond,
    • Achim K. Moesta,
    • Deepti Sharma,
    • Thorsten Graef,
    • Karina L. McQueen,
    • Lisbeth A. Guethlein,
    • Christine V.F. Carrington,
    • Dasdayanee Chandanayingyong,
    • Yih-Hsin Chang,
    • Catalina Crespí,
    • Güher Saruhan-Direskeneli,
    • Kamran Hameed,
    • Giorgi Kamkamidze,
    • Kwadwo A. Koram,
    • Zulay Layrisse,
    • Nuria Matamoros,
    • Joan Milà,
    • Myoung Hee Park,
    • Ramasamy M. Pitchappan,
    • D. Dan Ramdath,
    • Ming-Yuh Shiau,
    • Henry A.F. Stephens,
    • Siske Struik,
    • Dolly Tyan,
    • David H. Verity,
    • Robert W. Vaughan,
    • Ronald W. Davis,
    • Patricia A. Fraser,
    • Eleanor M. Riley,
    • Mostafa Ronaghi,
    • and Peter Parham
    Genome Res. May 2009 19: 757-769; doi:10.1101/gr.085738.108
    ...Free and University College Medical School, London NW3 2QG, United Kingdom; 15 Department of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London WC1E 7HT, United Kingdom; 16 Department of Pathology, Stanford University School of Medicine...
  5. ARTICLE: Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia
    • Piero Carninci,
    • Kazunori Waki,
    • Toshiyuki Shiraki,
    • Hideaki Konno,
    • Kazuhiro Shibata,
    • Masayoshi Itoh,
    • Katsunori Aizawa,
    • Takahiro Arakawa,
    • Yoshiyuki Ishii,
    • Daisuke Sasaki,
    • Hidemasa Bono,
    • Shinji Kondo,
    • Yuichi Sugahara,
    • Rintaro Saito,
    • Naoki Osato,
    • Shiro Fukuda,
    • Kenjiro Sato,
    • Akira Watahiki,
    • Tomoko Hirozane-Kishikawa,
    • Mari Nakamura,
    • Yuko Shibata,
    • Ayako Yasunishi,
    • Noriko Kikuchi,
    • Atsushi Yoshiki,
    • Moriaki Kusakabe,
    • Stefano Gustincich,
    • Kirk Beisel,
    • William Pavan,
    • Vassilis Aidinis,
    • Akira Nakagawara,
    • William A. Held,
    • Hiroo Iwata,
    • Tomohiro Kono,
    • Hiromitsu Nakauchi,
    • Paul Lyons,
    • Christine Wells,
    • David A. Hume,
    • Michela Fagiolini,
    • Takao K. Hensch,
    • Michelle Brinkmeier,
    • Sally Camper,
    • Junji Hirota,
    • Peter Mombaerts,
    • Masami Muramatsu,
    • Yasushi Okazaki,
    • Jun Kawai,
    • and Yoshihide Hayashizaki
    Genome Res. June 2003 13: 1273-1289; doi:10.1101/gr.1119703
    ...,000 transcriptional starting points. An estimate of the frequency of polyadenylation signals suggests that at least half of the singletons in the EST set represent real mRNAs. Clones accounting for about half of the predicted TUs await further sequencing. The continued high-discovery rate suggests that the task...
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