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Methods: Microarray-based multicycle-enrichment of genomic subsets for targeted next-generation sequencing
- Daniel Summerer,
- Haiguo Wu,
- Bettina Haase,
- Yang Cheng,
- Nadine Schracke,
- Cord F. Stähler,
- Mark S. Chee,
- Peer F. Stähler,
- and Markus Beier
Genome Res. September 2009 19: 1616-1621; Published in Advance July 28, 2009, doi:10.1101/gr.091942.109
...W, Zhang J, Li J, Zhang J, et al. 2008. The diploid sequence of an Asian individual. Nature 456: 60–65. Weese D, Emde A-K, Rausch T, Do¨ring A, Reinert K. 2009. RazerS—fast read mapping with sensitivity control. Genome Res (this issue). doi: 10.1101/ gr.088823.108. Received February 5, 2009; accepted...
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Research: A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon
- Joshua A. Baller,
- Jiquan Gao,
- Radostina Stamenova,
- M. Joan Curcio,
- and Daniel F. Voytas
Genome Res. April 2012 22: 704-713; Published in Advance January 4, 2012, doi:10.1101/gr.129585.111
...) pyrosequencing. A single 454 run produced between 13,000 and 111,000 sequence reads per pool (Table 1). The data were processed using a pipeline to identify those sequences with a perfect match to the terminus of the Ty1 LTR and a 98% match to genomic DNA, beginning within 3 bp of the end of the LTR...

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