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Research: Single worm transcriptomics identifies a developmental core network of oscillating genes with deep conservation across nematodes
- Shuai Sun,
- Christian Rödelsperger,
- and Ralf J. Sommer
Genome Res. September 2021 31: 1590-1601; Published in Advance July 22, 2021, doi:10.1101/gr.275303.121
.... pacificus is one of around 50 species in the genus Pristionchus, all of which are available as living cultures for molecular investigations (Kanzaki et al. 2021). Building on this high phylogenetic resolution, recent transcriptomic studies and deep taxon sampling revealed high evolutionary dynamics of novel...
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Research: Comparative genome analysis of programmed DNA elimination in nematodes
- Jianbin Wang,
- Shenghan Gao,
- Yulia Mostovoy,
- Yuanyuan Kang,
- Maxim Zagoskin,
- Yongqiao Sun,
- Bing Zhang,
- Laura K. White,
- Alice Easton,
- Thomas B. Nutman,
- Pui-Yan Kwok,
- Songnian Hu,
- Martin K. Nielsen,
- and Richard E. Davis
Genome Res. December 2017 27: 2001-2014; Published in Advance November 8, 2017, doi:10.1101/gr.225730.117
...) Ascaris developmental RNA expression profiles. The heatmap illustrates the dynamic expression of 10,874 genes (with average RPKM ≥5 or max RPKM ≥20) across the 25 different developmental stages of Ascaris (see Supplemental Material), including regions of the male germline (1, mitotic region; 2...

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