Searching journal content for articles similar to Wang and Kirkness 15 (12): 1798.

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  1. Resource: Recent, full-length gene retrocopies are common in canids
    • Kevin Batcher,
    • Scarlett Varney,
    • Daniel York,
    • Matthew Blacksmith,
    • Jeffrey M. Kidd,
    • Robert Rebhun,
    • Peter Dickinson,
    • and Danika Bannasch
    Genome Res. August 2022 32: 1602-1611; Published in Advance August 12, 2022, doi:10.1101/gr.276828.122
    ...et al. 2019; Batcher et al. 2020); however, short interspersed nuclear element (SINE) insertions, which are also mobilized in transby LINE-1 encoded proteins in a manner similar to gene retrocopies, have been shown to be highly dimorphic in dogs (Wang and Kirkness 2005; Halo et al. 2021).Although...
  2. Research: L1 retrotransposition is a common feature of mammalian hepatocarcinogenesis
    • Stephanie N. Schauer,
    • Patricia E. Carreira,
    • Ruchi Shukla,
    • Daniel J. Gerhardt,
    • Patricia Gerdes,
    • Francisco J. Sanchez-Luque,
    • Paola Nicoli,
    • Michaela Kindlova,
    • Serena Ghisletti,
    • Alexandre Dos Santos,
    • Delphine Rapoud,
    • Didier Samuel,
    • Jamila Faivre,
    • Adam D. Ewing,
    • Sandra R. Richardson,
    • and Geoffrey J. Faulkner
    Genome Res. May 2018 28: 639-653; Published in Advance April 11, 2018, doi:10.1101/gr.226993.117
    ..., despite lacking TSDs.The third ICC tumor-specific L1 insertion (Fig. 4C; Supplemental Fig. S8C), found in patient ICC.75, bore 16-bp TSDs, occurred at a near-perfect L1 endonuclease cleavage motif (5′-TT/AGAA-3′), and incorporated a short (18-bp) 3′ transduction flanked by 13- and 28-bp poly(A) tracts...
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  3. LETTER: Relaxation of selective constraint on dog mitochondrial DNA following domestication
    • Susanne Björnerfeldt,
    • Matthew T. Webster,
    • and Carles Vilà
    Genome Res. August 2006 16: 990-994; Published in Advance June 29, 2006, doi:10.1101/gr.5117706
    .... , Kirkness E.F. ( 2005 ) Short interspersed elements (SINEs) are a major source of canine genomic diversity. Genome Res. 15 : 1798 – 1808 . ↵ Wayne R.K. Ruvinsky A. , Sampson J. , et al. ( 2001 ) in The genetics of the dog , Consequences of domestication: Morphological diversity of the dog. eds Ruvinsky A...
  4. PERSPECTIVE: Comparing the human and chimpanzee genomes: Searching for needles in a haystack
    • Ajit Varki and
    • Tasha K. Altheide
    Genome Res. December 2005 15: 1746-1758; doi:10.1101/gr.3737405
    ...(short interspersed elements) can duplicate and spread throughout the by reverse transcription, causing potentially important functional changes in coding and flanking sequences ( Smit 1999 ; Carroll et al. 2001 ). Alu elements are the most abundant class of SINEs in humans, making up ∼10...
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