Searching journal content for articles similar to Tusso et al. 32 (2): 324.

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  1. Research: Accumulation and ineffective silencing of transposable elements on an avian W Chromosome
    • Vera M. Warmuth,
    • Matthias H. Weissensteiner,
    • and Jochen B.W. Wolf
    Genome Res. April 2022 32: 671-681; Published in Advance February 11, 2022, doi:10.1101/gr.275465.121
    ...@bio.lmu.deAbstractOne of the defining features of transposable elements (TEs) is their ability to move to new locations in the host . To minimize the potentially deleterious effects of de novo TE insertions, hosts have evolved several mechanisms to control TE activity, including recombination-mediated removal and epigenetic silencing...
  2. LETTER: Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica
    • Andrew J. Gentles,
    • Matthew J. Wakefield,
    • Oleksiy Kohany,
    • Wanjun Gu,
    • Mark A. Batzer,
    • David D. Pollock,
    • and Jerzy Jurka
    Genome Res. July 2007 17: 992-1004; Published in Advance May 10, 2007, doi:10.1101/gr.6070707
    ...Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica Andrew J. Gentles 1 , 2 , 6 , Matthew J. Wakefield 3 , Oleksiy Kohany 2 , Wanjun Gu 4 , Mark A. Batzer 5 , David D. Pollock 4...
  3. Research: Rates and spectra of de novo structural mutations in Chlamydomonas reinhardtii
    • Eugenio López-Cortegano,
    • Rory J. Craig,
    • Jobran Chebib,
    • Eniolaye J. Balogun,
    • and Peter D. Keightley
    Genome Res. January 2023 33: 45-60; Published in Advance December 12, 2022, doi:10.1101/gr.276957.122
    ...considerably between the two strains, with almost all inversions and translocations occurring in CC-2931 MA lines. This variation is associated with heterogeneity in the number and type of active transposable elements (TEs), which comprise major proportions of SMs in both strains (CC-1952 22%; CC-2931 38...
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  4. PERSPECTIVE: The opossum genome: Insights and opportunities from an alternative mammal
    • Paul B. Samollow
    Genome Res. August 2008 18: 1199-1215; doi:10.1101/gr.065326.107
    ...and the functional attributes of their components. Comparative analyses using the opossum genome have already provided a wealth of new evidence regarding the importance of noncoding elements in the evolution of mammalian genomes, the role of transposable elements in driving genomic innovation, and the relationships...
  5. Research: Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin
    • Nicole C. Riddle,
    • Aki Minoda,
    • Peter V. Kharchenko,
    • Artyom A. Alekseyenko,
    • Yuri B. Schwartz,
    • Michael Y. Tolstorukov,
    • Andrey A. Gorchakov,
    • Jacob D. Jaffe,
    • Cameron Kennedy,
    • Daniela Linder-Basso,
    • Sally E. Peach,
    • Gregory Shanower,
    • Haiyan Zheng,
    • Mitzi I. Kuroda,
    • Vincenzo Pirrotta,
    • Peter J. Park,
    • Sarah C.R. Elgin,
    • and Gary H. Karpen
    Genome Res. February 2011 21: 147-163; Published in Advance December 22, 2010, doi:10.1101/gr.110098.110
    ...). The hallmark of active genes in heterochromatic domains appears to be a loss of H3K9 methylation at the transcription start site. We also observe complex epigenomic profiles of intergenic regions, repeated transposable element (TE) sequences, and genes in the heterochromatic extensions. An unexpectedly large...
  6. LETTER: Genes and Transposons Are Differentially Methylated in Plants, but Not in Mammals
    • Pablo D. Rabinowicz,
    • Lance E. Palmer,
    • Bruce P. May,
    • Michael T. Hemann,
    • Scott W. Lowe,
    • W. Richard McCombie,
    • and Robert A. Martienssen
    Genome Res. December 2003 13: 2658-2664; doi:10.1101/gr.1784803
    ...transposable elements are methylated ( Bennetzen et al. 1994 ; Flavell 1994 ; Martienssen 1998 ), and can be reactivated in methylation-defective mutants ( Miura et al. 2001 ; Singer et al. 2001 ). However, methylation is unusual in plant genes, and is restricted to the 5′- and 3′-flanking regions in the few...
  7. LETTER: Analysis of sequence variability in the macronuclear DNA of Paramecium tetraurelia: A somatic view of the germline
    • Laurent Duret,
    • Jean Cohen,
    • Claire Jubin,
    • Philippe Dessen,
    • Jean-François Goût,
    • Sylvain Mousset,
    • Jean-Marc Aury,
    • Olivier Jaillon,
    • Benjamin Noël,
    • Olivier Arnaiz,
    • Mireille Bétermier,
    • Patrick Wincker,
    • Eric Meyer,
    • and Linda Sperling
    Genome Res. April 2008 18: 585-596; Published in Advance February 6, 2008, doi:10.1101/gr.074534.107
    ..., DNA is amplified to a final copy number of ∼800 n. Different classes of repeated sequences, such as transposable elements and minisatellite repeats, schematized here, are eliminated by an imprecise mechanism that leads to chromosome fragmentation and de novo telomere addition, but which in some cases...
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