Searching journal content for articles similar to Stein and Thierry-Mieg 8 (12): 1308.

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  1. RESOURCE: WormBase as an Integrated Platform for the C. elegans ORFeome
    • Nansheng Chen,
    • Daniel Lawson,
    • Keith Bradnam,
    • Todd W. Harris,
    • and Lincoln D. Stein
    Genome Res. October 15, 2004 14: 2155-2161; doi:10.1101/gr.2521304
    ...access to the Caenorhabditis elegans sequence and other ACEDB databases. Genome Res. 8 : 1308 -1315. ↵ Stein, L.D., Mungall, C., Shu, S., Caudy, M., Mangone, M., Day, A., Nickerson, E., Stajich, J.E., Harris, T.W., Arva, A., et al. 2002 . The generic browser: A building block for a model organism system...
  2. LETTER: Genome Annotation Assessment in Drosophila melanogaster
    • Martin G. Reese,
    • George Hartzell,
    • Nomi L. Harris,
    • Uwe Ohler,
    • Josep F. Abril,
    • and Suzanna E. Lewis
    Genome Res. April 1, 2000 10: 483-501; doi:10.1101/gr.10.4.483
    ...predictions in detail. Building annotation visualization tools is a daunting task. Many such tools have been developed, starting with ACeDB ( Eeckman and Durbin 1995 ; Stein and Thierry-Mieg 1998 ). We were fortunate in that the BDGP has built a flexible suite of visualization tools ( Helt et al. 1999...
  3. Methods: Assessment of SAGE in Transcript Identification
    • Erin D. Pleasance,
    • Marco A. Marra,
    • and Steven J.M. Jones
    Genome Res. June 2003 13: 1203-1215; Published in Advance May 12, 2003, doi:10.1101/gr.873003
    .... melanogaster and C. elegans and their associated tag mappings are available from http://sage.bcgsc.ca/tagmapping/ . The D. melanogaster ACEDB database is also available from this site. DISCUSSION We have shown that utilizing genomic annotation provides a more accurate strategy for the assignment of SAGE tags...
  4. ENSEMBL Special: An Overview of Ensembl
    • Ewan Birney,
    • T. Daniel Andrews,
    • Paul Bevan,
    • Mario Caccamo,
    • Yuan Chen,
    • Laura Clarke,
    • Guy Coates,
    • James Cuff,
    • Val Curwen,
    • Tim Cutts,
    • Thomas Down,
    • Eduardo Eyras,
    • Xose M. Fernandez-Suarez,
    • Paul Gane,
    • Brian Gibbins,
    • James Gilbert,
    • Martin Hammond,
    • Hans-Rudolf Hotz,
    • Vivek Iyer,
    • Kerstin Jekosch,
    • Andreas Kahari,
    • Arek Kasprzyk,
    • Damian Keefe,
    • Stephen Keenan,
    • Heikki Lehvaslaiho,
    • Graham McVicker,
    • Craig Melsopp,
    • Patrick Meidl,
    • Emmanuel Mongin,
    • Roger Pettett,
    • Simon Potter,
    • Glenn Proctor,
    • Mark Rae,
    • Steve Searle,
    • Guy Slater,
    • Damian Smedley,
    • James Smith,
    • Will Spooner,
    • Arne Stabenau,
    • James Stalker,
    • Roy Storey,
    • Abel Ureta-Vidal,
    • K. Cara Woodwark,
    • Graham Cameron,
    • Richard Durbin,
    • Anthony Cox,
    • Tim Hubbard,
    • and Michele Clamp
    Genome Res. May 2004 14: 925-928; Published in Advance April 12, 2004, doi:10.1101/gr.1860604
    ...-R., and Cox, A.V. 2004 . The Ensembl web site—mechanics of a browser. Genome Res. (this issue). ↵ Stein, L.D. and Thierry-Mieg, J. 1998 . Scriptable access to the Caenorhabditis elegans sequence and other ACEDB databases. Genome Res. 8 : 1308 -1315. ↵ Stein, L., Sternberg, P., Durbin, R., Thierry-Mieg, J...
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