Searching journal content for articles similar to Stankiewicz et al. 11 (7): 1205.

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  1. Research: Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee
    • Mario Ventura,
    • Claudia R. Catacchio,
    • Can Alkan,
    • Tomas Marques-Bonet,
    • Saba Sajjadian,
    • Tina A. Graves,
    • Fereydoun Hormozdiari,
    • Arcadi Navarro,
    • Maika Malig,
    • Carl Baker,
    • Choli Lee,
    • Emily H. Turner,
    • Lin Chen,
    • Jeffrey M. Kidd,
    • Nicoletta Archidiacono,
    • Jay Shendure,
    • Richard K. Wilson,
    • and Evan E. Eichler
    Genome Res. October 2011 21: 1640-1649; Published in Advance June 17, 2011, doi:10.1101/gr.124461.111
    ...chromosome translocation 4;19 in Gorilla gorilla is associated with microduplication of the chromosome fragment syntenic to sequences surrounding the human proximal CMT1A-REP. Genome Res 11: 1205–1210. Stanyon R, Rocchi M, Capozzi O, Roberto R, Misceo D, Ventura M, Cardone MF, Bigoni F, Archidiacono N. 2008...
  2. LETTER: Independent intrachromosomal recombination events underlie the pericentric inversions of chimpanzee and gorilla chromosomes homologous to human chromosome 16
    • Violaine Goidts,
    • Justyna M. Szamalek,
    • Pieter J. de Jong,
    • David N. Cooper,
    • Nadia Chuzhanova,
    • Horst Hameister,
    • and Hildegard Kehrer-Sawatzki
    Genome Res. September 2005 15: 1232-1242; doi:10.1101/gr.3732505
    ...as FISH probes to identify the breakpoint regions of the pericentric inversion of chimpanzee ( PTR ) and gorilla ( GGO ) chromosome XVI To identify an HSA BAC clone spanning the inversion breakpoint on the p-arm, we analyzed the 1.3-Mb fragment of scaffold_32947 that exhibited homology to HSA 16p...
  3. Research: Large duplications at reciprocal translocation breakpoints that might be the counterpart of large deletions and could arise from stalled replication bubbles
    • Karen D. Howarth,
    • Jessica C.M. Pole,
    • Juliet C. Beavis,
    • Elizabeth M. Batty,
    • Scott Newman,
    • Graham R. Bignell,
    • and Paul A.W. Edwards
    Genome Res. April 2011 21: 525-534; Published in Advance January 20, 2011, doi:10.1101/gr.114116.110
    ...fragments are shown as black bars joined with a dotted line. The same junction sequences (a, b, c, and d) would be generated by a reciprocal translocation with an ‘‘overlapping-breakpoint’’ duplication (above) or by an insertion of chromosome 6 (gray) into chromosome 4 (black) (below). Duplications...
  4. LETTER: Segmental Duplications in Euchromatic Regions of Human Chromosome 5: A Source of Evolutionary Instability and Transcriptional Innovation
    • Anouk Courseaux,
    • Florence Richard,
    • Josiane Grosgeorge,
    • Christine Ortola,
    • Agnes Viale,
    • Claude Turc-Carel,
    • Bernard Dutrillaux,
    • Patrick Gaudray,
    • and Jean-Louis Nahon
    Genome Res. March 1, 2003 13: 369-381; Published in Advance February 12, 2003, doi:10.1101/gr.490303
    ...of segmental duplications. The structure, organization and evolution of those primate-specific sequences were studied in detail by combining in silico and comparative FISH analyses on human, chimpanzee, gorilla, orangutang, macaca, and capuchin chromosomes. Our results lend support to a two-step model...
  5. Research: Independent expansion, selection, and hypervariability of the TBC1D3 gene family in humans
    • Xavi Guitart,
    • David Porubsky,
    • DongAhn Yoo,
    • Max L. Dougherty,
    • Philip C. Dishuck,
    • Katherine M. Munson,
    • Alexandra P. Lewis,
    • Kendra Hoekzema,
    • Jordan Knuth,
    • Stephen Chang,
    • Tomi Pastinen,
    • and Evan E. Eichler
    Genome Res. November 2024 34: 1798-1810; Published in Advance August 6, 2024, doi:10.1101/gr.279299.124
    ...duplications in the gorilla lineage.View larger version: In this window In a new window Figure 3. Large-scale chromosomal rearrangements and TBC1D3 duplications. (A) Synteny plots of orthologous Chromosome 17 in primates reveal syntenic blocks in direct (blue) and inverted (yellow) orientation. Alpha satellite...
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  6. Method: Detection and analysis of ancient segmental duplications in mammalian genomes
    • Lianrong Pu,
    • Yu Lin,
    • and Pavel A. Pevzner
    Genome Res. June 2018 28: 901-909; Published in Advance May 7, 2018, doi:10.1101/gr.228718.117
    ...Genet 18: 74–82. ↵Stankiewicz P, Park SS, Inoue K, Lupski JR. 2001. The evolutionary chromosome translocation 4;19 in Gorilla gorilla is associated with microduplication of the chromosome fragment syntenic to sequences surrounding the human proximal CMT1A-REP. Genome Res 11: 1205–1210. ↵Tarailo...
  7. ARTICLE: Serial segmental duplications during primate evolution result in complex human genome architecture
    • Paweł Stankiewicz,
    • Christine J. Shaw,
    • Marjorie Withers,
    • Ken Inoue,
    • and James R. Lupski
    Genome Res. November 2004 14: 2209-2220; doi:10.1101/gr.2746604
    ...unequal crossing-over constraint on this junction. Such genomic misalignments might have led to chromosome breakage and the origination of the evolutionary gorilla translocation t(4;19). Note the presence of a Charlie3 transposon at the edge of the SMS-REP fragment identified by sequencing the GGO 19...
  8. LETTER: Comparative Analysis of Gene-Expression Patterns in Human and African Great Ape Cultured Fibroblasts
    • Mazen W. Karaman,
    • Marlys L. Houck,
    • Leona G. Chemnick,
    • Shailender Nagpal,
    • Daniel Chawannakul,
    • Dominick Sudano,
    • Brian L. Pike,
    • Vincent V. Ho,
    • Oliver A. Ryder,
    • and Joseph G. Hacia
    Genome Res. July 2003 13: 1619-1630; doi:10.1101/gr.1289803
    ...involving human chromosomal regions 4p14–4q21 ( Nickerson and Nelson 1998 ), 12p12–12q15 ( Nickerson and Nelson 1998 ), and 17p13–17q21.3 ( Kehrer-Sawatzki et al. 2002 ), and the gorilla-specific reciprocal translocation t(4;19) ( Stankiewicz et al. 2001 ). View larger version: In this window In a new...
  9. ARTICLE: Large-Scale Variation Among Human and Great Ape Genomes Determined by Array Comparative Genomic Hybridization
    • Devin P. Locke,
    • Richard Segraves,
    • Lucia Carbone,
    • Nicoletta Archidiacono,
    • Donna G. Albertson,
    • Daniel Pinkel,
    • and Evan E. Eichler
    Genome Res. March 1, 2003 13: 347-357; doi:10.1101/gr.1003303
    ...) Assembly of microarrays for -wide measurement of DNA copy number. Nat. Genet. 29 : 263 – 264 . ↵ Stankiewicz P. , Park S.S. , Inoue K. , Lupski J.R. ( 2001 ) The evolutionary chromosome translocation 4;19 in Gorilla gorilla is associated with microduplication of the chromosome fragment syntenic...
  10. ARTICLE: Structure and Evolution of the Smith-Magenis Syndrome Repeat Gene Clusters, SMS-REPs
    • Sung-Sup Park,
    • Paweł Stankiewicz,
    • Weimin Bi,
    • Christine Shaw,
    • Jessica Lehoczky,
    • Ken Dewar,
    • Bruce Birren,
    • and James R. Lupski
    Genome Res. May 1, 2002 12: 729-738; doi:10.1101/gr.82802
    ...SMS-REP flanking sequences [PSFS]) were found to flank proximal SMS-REP and to be part of at least 410-kb LCR17pA, flanking proximal CMT1A-REP. LCR17pA has also been proposed to be responsible for the evolutionary chromosome translocation 4;19 in gorilla ( Stankiewicz et al. 2001 ). In addition...
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