Searching journal content for articles similar to Shang et al. 20 (9): 1219.

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  1. Review: The structure, function, and evolution of plant centromeres
    • Matthew Naish and
    • Ian R. Henderson
    Genome Res. February 2024 34: 161-178; Published in Advance March 14, 2024, doi:10.1101/gr.278409.123
    ...of centromere tandem repeat arrays has been limited in many species, as they could not be fully assembled using short-read sequencing (Miga and Sullivan 2021). However, Oxford Nanopore Technology (ONT) and Pacific Biosciences (PacBio) HiFi long-read sequencing now allow complete assembly of complex centromere...
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  2. Research: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
    • Matthias H. Weissensteiner,
    • Andy W.C. Pang,
    • Ignas Bunikis,
    • Ida Höijer,
    • Olga Vinnere-Petterson,
    • Alexander Suh,
    • and Jochen B.W. Wolf
    Genome Res. May 2017 27: 697-708; Published in Advance March 30, 2017, doi:10.1101/gr.215095.116
    ...of the crowSat1 satellite in nearby primary sequence. Hence, the sequence is likely not composed of short tandem repeats as, for example, human centromeric alpha satellites with repeat units of ∼170 bp (Willard 1991). Few examples of centromeric, heterochromatic repeats exhibit motif sizes >1 kb. Miga et al...
  3. Research: Maize centromeres expand and adopt a uniform size in the genetic background of oat
    • Kai Wang,
    • Yufeng Wu,
    • Wenli Zhang,
    • R. Kelly Dawe,
    • and Jiming Jiang
    Genome Res. January 2014 24: 107-116; Published in Advance October 7, 2013, doi:10.1101/gr.160887.113
    ...in moderately repetitive genomic regions interspersed with single-copy sequences (Marshall et al. 2008), whereas nearly allmature centromeres contain long arrays of satellite repeats (Henikoff et al. 2001; Jiang et al. 2003). The transition from a neocentromere to a stable mature centromere presumably involves...
  4. Resource: A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes
    • Jing Liu,
    • Zongji Wang,
    • Jing Li,
    • Luohao Xu,
    • Jiaqi Liu,
    • Shaohong Feng,
    • Chunxue Guo,
    • Shengchan Chen,
    • Zhanjun Ren,
    • Jinpeng Rao,
    • Kai Wei,
    • Yuezhou Chen,
    • Erich D. Jarvis,
    • Guojie Zhang,
    • and Qi Zhou
    Genome Res. March 2021 31: 497-511; Published in Advance January 6, 2021, doi:10.1101/gr.271569.120
    ...). Similar microchromosome centromere enriched repeats, but with different sequences, have also been reported in chicken (chicken nuclear membrane associated repeats, CNM) (Matzke et al. 1990; Shang et al. 2010) and other bird and turtle species (Yamada et al. 2002; Yamada et al. 2005; Nishida et al. 2013...
  5. Research: Birth, evolution, and transmission of satellite-free mammalian centromeric domains
    • Solomon G. Nergadze,
    • Francesca M. Piras,
    • Riccardo Gamba,
    • Marco Corbo,
    • Federico Cerutti,
    • Joseph G.W. McCarter,
    • Eleonora Cappelletti,
    • Francesco Gozzo,
    • Rebecca M. Harman,
    • Douglas F. Antczak,
    • Donald Miller,
    • Maren Scharfe,
    • Giulio Pavesi,
    • Elena Raimondi,
    • Kevin F. Sullivan,
    • and Elena Giulotto
    Genome Res. June 2018 28: 789-799; Published in Advance April 30, 2018, doi:10.1101/gr.231159.117
    ...neocentromeres. Although they did not detect any obvious increase in chromosome rearrangements over extended (several megabases long) regions, we precisely identified sequence rearrangements contained within functional, CENPA binding, centromeric domains in this work.Five donkey centromeres exhibit tandem...
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