Searching journal content for articles similar to Schon et al. 28 (12): 1931.

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  1. Method: Simple and efficient profiling of transcription initiation and transcript levels with STRIPE-seq
    • Robert A. Policastro,
    • R. Taylor Raborn,
    • Volker P. Brendel,
    • and Gabriel E. Zentner
    Genome Res. June 2020 30: 910-923; Published in Advance July 6, 2020, doi:10.1101/gr.261545.120
    ...reverse transcription (STRT) (Islam et al. 2011), RNA annotation and mapping of promoters for the analysis of gene expression (RAMPAGE) (Batut et al. 2013), Tn5Prime (Cole et al. 2018), and parallel analysis of RNA 5′ ends from low input (nanoPARE) (Schon et al. 2018). Although TSRT provides additional...
  2. Method: FFPEcap-seq: a method for sequencing capped RNAs in formalin-fixed paraffin-embedded samples
    • Jeffery M. Vahrenkamp,
    • Kathryn Szczotka,
    • Mark K. Dodson,
    • Elke A. Jarboe,
    • Andrew P. Soisson,
    • and Jason Gertz
    Genome Res. November 2019 29: 1826-1835; Published in Advance October 24, 2019, doi:10.1101/gr.249656.119
    .... Comparative analysis of RNA sequencing methods for degraded or low-input samples. Nat Methods 10: 623–629. doi:10.1038/nmeth.2483 ↵Adiconis X, Haber AL, Simmons SK, Levy Moonshine A, Ji Z, Busby MA, Shi X, Jacques J, Lancaster MA, Pan JQ, et al. 2018. Comprehensive comparative analysis of 5′-end RNA...
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  3. Research: Genome-wide analysis of plant miRNA action clarifies levels of regulatory dynamics across developmental contexts
    • Xiaoli Ma,
    • Tom Denyer,
    • Marie Javelle,
    • Antje Feller,
    • and Marja C.P. Timmermans
    Genome Res. May 2021 31: 811-822; Published in Advance April 16, 2021, doi:10.1101/gr.270918.120
    ...the course of evolution for major innovations, such as the formation of vasculature, meristems, flattened leaves, roots, and seed (Plavskin and Timmermans 2012). Although broadly conserved, individual miRNA families continue to diverge. The evolutionary changes in plant architecture occurred in parallel...
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