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  1. ...-dependent nucleosome remodeling. Annu Rev Biochem 71: 247–273. BlumbergDD, Agarwal AK, SlogerMS, Yoder BK. 1991. Gene expression and chromatin structure in the cellular slimemold,Dictyostelium discoideum. Dev Genet 12: 65–77. Bouazoune K, Kingston RE. 2012. Chromatin remodeling by the CHD7 protein is impaired...
  2. ...modifications (H3K27ac, H3K4me1, and H3K27me3). A correlation heat map of the resulting histone modification enrichment profiles validated our data sets since, as expected, activating marks grouped closely together (Supplemental Fig. S3B). Subsequent clustering of the resulting chromatin profiles along...
  3. ...identified several key features of gene enhancer elements. Specifically, enhancer elements correlate with the location of mono-methylated lysine 4 of histone H3 (H3K4me1), are located in open chromatin that is hypersensitive to DNase digestion, and often exhibit cell type–specific localization patterns...
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