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Scannell and Wolfe 18 (1): 137
.
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Research
:
Plant genome evolution in the genus
Eucalyptus
is driven by structural rearrangements that promote sequence divergence
Scott Ferguson
,
Ashley Jones
,
Kevin Murray
,
Rose Andrew
,
Benjamin Schwessinger
,
and
Justin Borevitz
Genome Res.
April 2024
34
:
606
-
619
;
Published in Advance
April 8, 2024
,
doi:
10.1101/gr.277999.123
...by an evolutionary view dominated by
genes
and
gene
variants, many s from various species have been sequenced and, by identifying their
genes
and
gene
variants, have provided us with a better understanding of the processes of
evolution
, divergence, and speciation (Rellstab et al. 2015; Schumer et al. 2015; Meier et...
Abstract
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Method
:
Unveiling the functional fate of duplicated genes through expression profiling and structural analysis
Alex Warwick Vesztrocy
,
Natasha Glover
,
Paul D. Thomas
,
Christophe Dessimoz
,
and
Irene Julca
Genome Res.
October 2025
35
:
2273
-
2284
;
Published in Advance
August 14, 2025
,
doi:
10.1101/gr.280166.124
...), or neofunctionalization (one copy may retain the ancestral function, whereas the other acquires a new function) (Lynch and Force 2000; Adams and Wendel 2005; Sehrish et al. 2014). Thus,
gene
duplication
can provide the raw material for the
evolution
of functional innovation.
Asymmetric
sequence
evolution
of paralogs can...
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LETTER
:
Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes
Romain A. Studer
,
Simon Penel
,
Laurent Duret
,
and
Marc Robinson-Rechavi
Genome Res.
September 2008
18
:
1393
-
1402
;
Published in Advance
June 18, 2008
,
doi:
10.1101/gr.076992.108
...Pervasive positive selection on
duplicated
and nonduplicated vertebrate protein coding
genes
Romain A. Studer 1 , 2 , Simon Penel 3 , Laurent Duret 3 , and Marc Robinson-Rechavi 1 , 2 , 4 1 Department of Ecology and
Evolution
...
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Research
:
Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary
Kevin Vanneste
,
Guy Baele
,
Steven Maere
,
and
Yves Van de Peer
Genome Res.
August 2014
24
:
1334
-
1347
;
Published in Advance
May 16, 2014
,
doi:
10.1101/gr.168997.113
..., were accompanied by a ploidy increase (Wood et al. 2009). Most recent insights explaining the evolutionary success of polyploids have focused on their
duplicated
, which simultaneously provides thousands of novel
genes
for
evolution
to tinker with. Even though the large majority of these
duplicated
...
Abstract
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Perspective
:
Phylogenomics of primates and their ancestral populations
Adam Siepel
Genome Res.
November 2009
19
:
1929
-
1941
;
Published in Advance
October 3, 2009
,
doi:
10.1101/gr.084228.108
...; Gross and Brent 2006). Moreover, it extends readily to non-sequence data, including
gene
family size (Hahn et al. 2005), categories of protein function (Engelhardt et al. 2005), and protein–protein interactions (Barker and Pagel 2005). ARGuments for considering population dynamics By modeling
evolution
...
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Single-cell gene signature scoring
Chromosome engineering in 8p syndrome
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Short tandem repeat genotyping using long reads
Spectral component approach for recent population structure
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